Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03629 ATGGCAGCCTTCTCCAAGTCCAAGCTTCAATCTAGAGTACTTGTTCTTGTTCTCAACTTGTCTTCCGTCTTCCTCTTCTGTATCCTTCTAAAGCTTTATCTCCACCCTCCTAACTCAAGTTCACAAGGCCAGTCCAATGGCTCTCTTCCCCTCACAATCTTAAACCATGCAAGGTTGTCCAGAGATGTTAGTGTTGAAGGCTGCTCTGATATACACAAGTATCCAGATTATGGCTCCAAGTGCTTATATGTCAAAAGTAATCTTGAGTGCAGGTCAAAAGGGTACATCAACTATCTTCAAATCTTCTACTGCAACTTCGAAAAATTCCCAATTTTGGGACAAGCTCTCCTTGCCTTGTGGCTAGCGGTGTTGTTTTATCTATTGGGTGACACAGCTTCCAACTACTTCTGTAGTTCCTTGGAGGGTTTGTCCAACATCTTGAGGCTCTCCCCCACCATTGCTGGAGTGACCCTTCTTTCTCTGGGAAATGGGGCTCCTGATTTCTTTGCTAGTGTTGTGTCTTTCACAGGATCATCCAGCAATGGTGCTGTTGGATTCAACAGCATCCTAGGAGGGTCTTTCTTTGTGTCATGTGCTGTCTTGGGGATCATAAGCATTCTGGTTAGCCCAAATCAAGTTGAGGTTGATAAGGCCAGTTTCATCAGGGATGTCCTTTTCTTCCTTTTCTCTCTTCTCATCCTCCTCGTCATCATTTACATTGGTAAAATCACTTTGTTTGCTTCAATCTGCTATGTTTCTATCTACTTCCTCTACGTCTGTGCTGTCTCAGCCACACATCTCATATATGGAGGGGACACAATAAATGAAAAGCAGCACTCAATGTCATACGAGTCACTAGAGTCTAGCATACCTTTGTTGGGCTATGTTGATGAAGAAAAACAAAGTTTGGCAGAGATAGTGGTGGTTGAAGATAAGGAGCAAAAGGCAGCTAGTATTTTTGGTCAGAATTCATTGTTTGATTGCATTTACTTGGGAAAGATTCTACAAGTACTAGAACTACCTCTTTGCTTACCAAGAAAGCTTACCATTCCAGTGGTGAGTGAGGAGAAGTGGTCAAAGCCATATGCAGTAATATCTGTCACATTAGCACCAGTTTTACTAGCAGTTCTTTTCAATACTCAAAGTGAAAACGTGGTTTCAAGGAACAGCCTAGTCACATACATGGTAGCTGCTTTGATTGGGATAGTTTTGGGTAACATGGCATGCGTGACAACTGAAAGGTGTAGCCCACCAACCAAGTCCTTGTTTCCTTGGCTGGCTGGTGGCTTTTCCATGAGTGTTACATGGACTTATATAATTGCCGAGGAGCTAGTTTCTCTCTTGATTTCAATTGGGAGCATCATTGGGGTTAGCCCTTCAATTCTAGGACTAACCGTCCTAGCTTGGGGCAACTCACTTGGTGACTTGATAGCCAATGGTGCCATGGCCTTGAATGGTGGGCCAGATGGTGTCCAAATGGCCATATCTGGTTGCTATGCTGGTCCTATGTTCAATACCTTAATGGGTTTGGGCTTGCCCCTTGTTCTCTCAGCTTGGTCTGAACATCCAGACCCTTATGTCACTCCTAAGGATCCTTCACTTTATGAGACCCTTTTGTTCTTGATGGGAGGGCTTCTTTGGGCCCTTGTGATCTTGCCGAAGAAGAGTATGAAGTTGGATAAATCCTTCGGGGCAGGGCTATTGAGTGTGTACCTCTGCTTTTTGGTTACAAGGATTGCCATGGCTATTGGGGTGCTTAACTTCTAG 1767 0.4409 MAAFSKSKLQSRVLVLVLNLSSVFLFCILLKLYLHPPNSSSQGQSNGSLPLTILNHARLSRDVSVEGCSDIHKYPDYGSKCLYVKSNLECRSKGYINYLQIFYCNFEKFPILGQALLALWLAVLFYLLGDTASNYFCSSLEGLSNILRLSPTIAGVTLLSLGNGAPDFFASVVSFTGSSSNGAVGFNSILGGSFFVSCAVLGIISILVSPNQVEVDKASFIRDVLFFLFSLLILLVIIYIGKITLFASICYVSIYFLYVCAVSATHLIYGGDTINEKQHSMSYESLESSIPLLGYVDEEKQSLAEIVVVEDKEQKAASIFGQNSLFDCIYLGKILQVLELPLCLPRKLTIPVVSEEKWSKPYAVISVTLAPVLLAVLFNTQSENVVSRNSLVTYMVAALIGIVLGNMACVTTERCSPPTKSLFPWLAGGFSMSVTWTYIIAEELVSLLISIGSIIGVSPSILGLTVLAWGNSLGDLIANGAMALNGGPDGVQMAISGCYAGPMFNTLMGLGLPLVLSAWSEHPDPYVTPKDPSLYETLLFLMGGLLWALVILPKKSMKLDKSFGAGLLSVYLCFLVTRIAMAIGVLNF 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03629 588 Gene3D - 149 323 IPR044880 -
Spst1g03629 588 Gene3D - 362 580 IPR044880 -
Spst1g03629 588 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 27 586 - -
Spst1g03629 588 Pfam Sodium/calcium exchanger protein 426 579 IPR004837 GO:0016020|GO:0055085
Spst1g03629 588 Pfam Sodium/calcium exchanger protein 118 261 IPR004837 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03629 Spst-Chr1 45797937 45799703 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g03629 76 587 Antiporters AT5G17860 52.408 6.43e-175 504
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03629 K13754 - gmx:100811635 930.243