Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03628 ATGGGGTTCAGATTCAGTTTCACCTTGTTCCTGAACATTTCCTTCCTCGTCATAGTGTTTTGTGTTTCTCTTATGCCCCACTTCTACTCTTCAGAACCTTCAGATTATGTTTTTCTGAAGAGCAACCGGTTTGGCTTGAGGGGGGATGAAGAAGATTGCAAAAGTTTTCACAAATTGAGGGACTCAAAAGCCAAGTGCTTGTACTTGAAATCCAATGATCCATGTGTTTCTCAGGGTTATGTTGATTACCTTTACCTTTTCTATTGCAAATTAGGGGGTTCCCCTCTATTGGGTCACGGTCTTTTGTTTCTTTGGCTTTTGGTTCTGTTCTATCTGTTGGCCAACACTGCCTCTGATTACTTTTGTCCTTCTCTTGAGAACTTGTCCAAACTGCTGAGGCTCTCTCCCACAATTGCTGGGGTGACTCTTCTCTCTCTTGGCAATGGTGCTTGTGATGTTTTTTCCACCCTTGTCTCTTTCAAGGGTAGTGGGACCCAGGACATTGGTTTCAACACTGTGCTTGGAGGTACTTCCTTTGTTTCCTGTGTTGTGGTTGGAATAGTGAGCATTTCAATTAGGCATAGGGAGATTCGGATCAAGAAGTGGGCGTTGGTGAGAGATGTTTGTTTTCTTCTCTTGGTTCTTCTCTGTTTGTTAATAATTTTGATCACTGGTGAGGTCAGTGTTCCTGGGGCAATTGGTTTTTGCTTGATTTATGTGGTCTATGTGGTGGTTGTTTATGTCTCATCTAACCGAGTGAAGAAAGGTGTGTTTGGAGATGCTGATGCTGACTGTGATCGTGATTTGAGTCATGGTGGCGGCAATGATTTAGGTGTCCCTTTGCTCAGTGAGATGGAGAAAGGACTCGCAAATACAGCTCAGGAATGTGACATGAAAATTGGGAGGAAATGTTGCTGTTTAAAATCTTCAATTTGTAGAATGTTACTTTTTGCAATGGAGATGCCCCTTTACTTGCCAAGGAGATTGACAATTCCTGTTATTTGTGAAGAGCGATGGTCCAAAGGGTATGCAGTTTGTTCAGCTATGCTAGCTCCACTTCTATTGTCTTTCTTGTGGGTATCAAGCAAGGAAGACAGCTTCAACTCAAGCCTTATTGTATATGGAATTGGATTGTTGGTTGGGATTACATTAGGGGTGACAGTATTTTTCACAACCAATGTGTCAAGCCCTCCAAGGAAGTACCTGTTTCCTTGGCTTGCAGGAGGATTTGTGATGAGTGTGACTTGGAGCTACATTTCAGCTCAAGAATTGGTGGGGTTGTTGGTTTCACTTGGTTACATATGTGGAGTTAGTCCTTCAATTCTGGGGCTAACAGTTCTTGCCTGGGGGAATTCACTTGGGGATTTAGTGACAAATTTGACATTGGCTTTGTATGGTGGAGCACAAGGTACTCAAATAGCAATATCAGGATGTTATGCTGGCCCTATCTTCAATATAGTGGTTGGATTGGGCTTATCTCTTGTGAGCACTACTTTTTCTCAGTACCCAGCTGTTGTTGTTTTCCCTAGAGATCCATATCTTTGGGAGACATTAGCACTTTTGGCAGTTGGATTGGTTTGGGCTCTTGTTGTGTTGATTAGAAGAGACATGAAACTTGATGCACTGTTGGGAGGAGGGCTTCTGGTTATTTACTTCATTTCTCTGTTTCTGAGGCTGATTCAGTCACTTGGGTCTCTCCAATTTCAGGATGTGTTAAACTCACTCTTCATAAGATGA 1737 0.426 MGFRFSFTLFLNISFLVIVFCVSLMPHFYSSEPSDYVFLKSNRFGLRGDEEDCKSFHKLRDSKAKCLYLKSNDPCVSQGYVDYLYLFYCKLGGSPLLGHGLLFLWLLVLFYLLANTASDYFCPSLENLSKLLRLSPTIAGVTLLSLGNGACDVFSTLVSFKGSGTQDIGFNTVLGGTSFVSCVVVGIVSISIRHREIRIKKWALVRDVCFLLLVLLCLLIILITGEVSVPGAIGFCLIYVVYVVVVYVSSNRVKKGVFGDADADCDRDLSHGGGNDLGVPLLSEMEKGLANTAQECDMKIGRKCCCLKSSICRMLLFAMEMPLYLPRRLTIPVICEERWSKGYAVCSAMLAPLLLSFLWVSSKEDSFNSSLIVYGIGLLVGITLGVTVFFTTNVSSPPRKYLFPWLAGGFVMSVTWSYISAQELVGLLVSLGYICGVSPSILGLTVLAWGNSLGDLVTNLTLALYGGAQGTQIAISGCYAGPIFNIVVGLGLSLVSTTFSQYPAVVVFPRDPYLWETLALLAVGLVWALVVLIRRDMKLDALLGGGLLVIYFISLFLRLIQSLGSLQFQDVLNSLFIR 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03628 578 Gene3D - 134 260 IPR044880 -
Spst1g03628 578 Gene3D - 336 559 IPR044880 -
Spst1g03628 578 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 309 567 - -
Spst1g03628 578 Pfam Sodium/calcium exchanger protein 103 247 IPR004837 GO:0016020|GO:0055085
Spst1g03628 578 Pfam Sodium/calcium exchanger protein 406 558 IPR004837 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03628 Spst-Chr1 45781828 45783564 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g03628 1 567 Antiporters AT5G17850 50.519 6.87e-166 482
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03628 K13754 - gmx:100787016 837.41