Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03623 ATGGTATACTGCAGTCACTGTGCCAAAAATGTTGCTGGCGAGCGACTAGATGATGGTTTCTTATGTTGTGGAAGCTGTGGGAGGGTGTTGGAAGATTACTTTTTTGCTGAGGAACCTACATTTGTCAAGAATGCATCGGGGCAGAGGCTTGATCTATTTTCATTAAGGACTGATGGGGATTTGGATTACTTGAGGTTTAAGTCTTTGATTGCAAGTATGAGTAAATTATCAGGAAATTATGTAAGAACAGTTCAAAGCGAGTTCTCTGAGTCACGTCAAAGGACTTTAGATAGAGCTTATGATGAAATTAAATATCTAAGTTTTGGCCTTGGAGTTAATGATGAACATATGGCTGACCAAGCATTGACCTTTTATAAAATAGCACTAGAGCGAAATTTCACCCGTGGACGAAGATCAGAACAAGTACACGCTGCTTGTCTCTATATTGCATTTCGGTATTTGCTAGGATCAGTTTTCTTGCAGCTTTGTCAAGTATTGAGGCTTGGAGAGCACCCAATTGTTCAAAAGCCTATTGATCCTAGTCTTTTTATTCATAGATATACTAAAAATTTGATAAAGCGAGGTAGTAAGGCAGTCTCTGATACTGCGCTGACCATTGTTGCAAGCATGAAACGTGACTGGATGCAGACAGGGAGGAAACCTAGTGGACTATGCGGTGCTGCATTATACATATCTGCTCTTGCACATGGTATTAAATGCTCTAAGCCTGATATTCTCAGAATAGTCCATGTATGTGAAGCAACATTGACCAAACGATTGGTAGAATTTGAGAACACAGAGTGCTCTAGCTTGACAATTGAGGAGTTGGATACCATGGCAAAGGAGCAAGAAAACAATCCAACGGTAATGCCAGAAGGTGAACTAAAAGGATGTATTTCAAAAGATCTATTGTGTGAGCACAAAGATAGTGGGGCATCCCATTTTGCGCTTGGATTGTGCGAAGCATGCTATAAAGATTTCGATAAGCTCTCTGGTGGGCTTGGTGGTGGTTTGGATCCTCCTGCATTCCAGCGTGCTGAGAGGGAAAGAATGAAAAAAGCACTTCAGGAAGAGAGTGTTGATGAAGCATGTGATTTTCATCCCAAAAGAGAAAAGATAATCCATGTCCACAAACTCACTCCATAG 1146 0.4092 MVYCSHCAKNVAGERLDDGFLCCGSCGRVLEDYFFAEEPTFVKNASGQRLDLFSLRTDGDLDYLRFKSLIASMSKLSGNYVRTVQSEFSESRQRTLDRAYDEIKYLSFGLGVNDEHMADQALTFYKIALERNFTRGRRSEQVHAACLYIAFRYLLGSVFLQLCQVLRLGEHPIVQKPIDPSLFIHRYTKNLIKRGSKAVSDTALTIVASMKRDWMQTGRKPSGLCGAALYISALAHGIKCSKPDILRIVHVCEATLTKRLVEFENTECSSLTIEELDTMAKEQENNPTVMPEGELKGCISKDLLCEHKDSGASHFALGLCEACYKDFDKLSGGLGGGLDPPAFQRAERERMKKALQEESVDEACDFHPKREKIIHVHKLTP 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03623 381 Gene3D - 179 269 - -
Spst1g03623 381 Gene3D - 2 170 - -
Spst1g03623 381 PANTHER TRANSCRIPTION INITIATION FACTOR IIB-RELATED 2 360 IPR000812 GO:0006352|GO:0070897
Spst1g03623 381 SUPERFAMILY Cyclin-like 178 270 IPR036915 -
Spst1g03623 381 CDD CYCLIN_TFIIIB90_rpt2 176 266 - -
Spst1g03623 381 FunFam Transcription factor IIIB subunit 179 268 - -
Spst1g03623 381 SUPERFAMILY Cyclin-like 99 166 IPR036915 -
Spst1g03623 381 Pfam Transcription factor TFIIB repeat 175 265 IPR013150 GO:0017025
Spst1g03623 381 Pfam Transcription factor TFIIB repeat 93 152 IPR013150 GO:0017025
Spst1g03623 381 SUPERFAMILY Zinc beta-ribbon 2 46 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g03623 1 359 Inorganic Solute Cotransporters AT2G01280 45.553 1.52e-98 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03623 K15196 - gmx:100817609 605.52