Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03615 ATGAAGTTCTTCACGATTCTTATCTTTTTCCTTGTCTTTCCCATTGCATTTGGTGATCTGAGAGTTGGATTCTATCACTCTAGCTGCCCCAGAGCAGAGAAAATCGTTCGACAAGTTGTTCAAAGGAGATTCAACCGGGATCGATCCATTACTGGTGGCTTGCTACGCATGCACTTTCATGATTGCTTTGTCAGAGGCTGTGACGCGTCCATATTAATAGACTCAAACAGGGGCAACCAATCGGAGAAATCGGAGAAAGCCGCAGGGGCAAACGGTACCGTTCGGGGGTTCAAGCTAATAGACGATATAAAAAAAGCTTTAGAAACTGCATGTCCTTCAACGGTTTCATGCGCAGATATAATAACCCTAGCCACACGCGATTCCGTGGCCATGGCAGGTGGGCCCCGATACAATGTCCCAACAGGAAGGCGTGATGGTCTCGTGTCCAGAGCCGCCGAAGTGTTCTTGCCAGGACCACGTTCGACTGTGTTGCAGGCGCAGCAAACCTTCACCGCAAATGGCCTGTCATTGGATGAAATGATCGCACTCTTGGGAGCACACACGGTGGGATTCGCGCACTGTAATTTCTTCCGCGACAGGCTCAACGACTCCAACATGGACCCTAATTTGCGGGCCAAGTTAGGCCAGACTTGTAGACCCATGGGCCAAGATCCGACGGCTTTTTTGGACCAAAAGACGTCCACGGTTTTTGACAATGAATTCTATAAGCAAATCATTTTAAAGAGGGGTGTGCTTTTTATTGATCAACAATTGGCTTCAGACCCTTTGTCGAGTAGGTTGGTGTCGACTTTTGCTGGGAATAGTGCGGCTTTCAAGAAGAGTTTCGTTGATGCTATTGTGAAGATGGGGAGCATTAGGGTTTTGGTTGGGACAAATGGAGAGATTAGGAAAAATTGTAGGGCTTTTAACTAA 933 0.4748 MKFFTILIFFLVFPIAFGDLRVGFYHSSCPRAEKIVRQVVQRRFNRDRSITGGLLRMHFHDCFVRGCDASILIDSNRGNQSEKSEKAAGANGTVRGFKLIDDIKKALETACPSTVSCADIITLATRDSVAMAGGPRYNVPTGRRDGLVSRAAEVFLPGPRSTVLQAQQTFTANGLSLDEMIALLGAHTVGFAHCNFFRDRLNDSNMDPNLRAKLGQTCRPMGQDPTAFLDQKTSTVFDNEFYKQIILKRGVLFIDQQLASDPLSSRLVSTFAGNSAAFKKSFVDAIVKMGSIRVLVGTNGEIRKNCRAFN 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03615 310 CDD secretory_peroxidase 20 309 IPR033905 GO:0004601|GO:0042744
Spst1g03615 310 FunFam Peroxidase 23 169 - -
Spst1g03615 310 PRINTS Haem peroxidase superfamily signature 230 245 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst1g03615 310 PRINTS Haem peroxidase superfamily signature 133 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst1g03615 310 PRINTS Haem peroxidase superfamily signature 179 194 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst1g03615 310 PRINTS Haem peroxidase superfamily signature 51 65 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst1g03615 310 PRINTS Haem peroxidase superfamily signature 115 132 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst1g03615 310 Gene3D Peroxidase, domain 2 157 289 - -
Spst1g03615 310 PRINTS Plant peroxidase signature 114 124 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst1g03615 310 PRINTS Plant peroxidase signature 228 243 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst1g03615 310 PRINTS Plant peroxidase signature 53 73 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst1g03615 310 PRINTS Plant peroxidase signature 29 48 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst1g03615 310 PRINTS Plant peroxidase signature 244 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst1g03615 310 PRINTS Plant peroxidase signature 95 108 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst1g03615 310 PRINTS Plant peroxidase signature 133 148 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst1g03615 310 PRINTS Plant peroxidase signature 284 297 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst1g03615 310 PRINTS Plant peroxidase signature 178 190 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst1g03615 310 ProSiteProfiles Plant heme peroxidase family profile. 19 310 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst1g03615 310 ProSitePatterns Peroxidases proximal heme-ligand signature. 179 189 IPR019793 -
Spst1g03615 310 ProSitePatterns Peroxidases active site signature. 51 62 IPR019794 GO:0004601
Spst1g03615 310 FunFam Peroxidase 157 289 - -
Spst1g03615 310 SUPERFAMILY Heme-dependent peroxidases 19 310 IPR010255 GO:0004601|GO:0006979|GO:0020037
Spst1g03615 310 PANTHER - 6 310 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst1g03615 310 Gene3D - 24 310 - -
Spst1g03615 310 Pfam Peroxidase 36 273 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03615 Spst-Chr1 45609657 45611267 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g03615 2 310 Peroxidase AT5G17820 56.467 7.54e-121 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03615 K00430 - gmx:100820340 459.529