Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03613 ATGGAAGATGAGAGACAGAAAGAGGCAAAGAGTCCAAGGCATGGCCCCGAGAAGAGTGAAGCGGTTCGGTCAAGGTGGACTCCGAAGCCGGAACAAATTCTCATACTAGAATCCATCTTCAACAGTGGCATGGTGAATCCTCCAAAGGATGAAACCGTCAGAATAAGGAAACTGCTTGAGAAATTCGGCACTGTTGGTGACGCCAACGTCTTCTATTGGTTCCAGAACCGCCGCTCCAGATCTCGCCGCCGCCAGCGCCAGATGATGCAGCAGGCCGCTGCCACCGCAGCTGTTAACCACCCTCAGCCCCAGGCTCAACCTCAGCCTCATGGTCTTGTAGGTGGTGGTGCAATTCAGCATGATCATCATACTCTGGTTAATCTTGTTGCAAGTGAAAGTGCTACTTCAAACATGGGTTTTGGTTCTTGCCCTTCTTATGATCTCCTAGGTGGTTCCTCTTCATCATGTGGTGGTGGTGGTGGTGGTGGACAACAAGCCATGGATGGTTTCTTTTCTATTTCTTCTCCTCAAATGGGTTTTCCTGAAATAATTGACCACACCTCACCTGCATCATCAGTTTTGCTCCCTCCTTTTGATCCAAATTTGAGCTTCCACACTGGATATGGGAGCACCAATATTTCAGCATTCATCACAGTTTTTATCAATGGGATTGCAACAGAACTTCCAAAGGGACCAATAGACATCAAGACCGTGTTTGGAGAAGATGTAATGTTAGTTCATTCCTCTGGAGTGCCAATTCTCACAAATGAATTCGGATTCTTGATGCAGAATCTTCAGCATGGAGAAAGCTACTTTCTGGTTGGCATATACAGCATATATATCTTCAAATCAATTGCTTCTATTCCAAATCATGTGCTGTATCAAAGCCAACATAGGTATGAACACAACAGCCTTAGCAGCAATGGAAAACTTCCTTTTCGAGTTTCTCTGTTAGCTTTGTCTGCTCCTCTTGTTTCCTTTTAA 984 0.4543 MEDERQKEAKSPRHGPEKSEAVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGTVGDANVFYWFQNRRSRSRRRQRQMMQQAAATAAVNHPQPQAQPQPHGLVGGGAIQHDHHTLVNLVASESATSNMGFGSCPSYDLLGGSSSSCGGGGGGGQQAMDGFFSISSPQMGFPEIIDHTSPASSVLLPPFDPNLSFHTGYGSTNISAFITVFINGIATELPKGPIDIKTVFGEDVMLVHSSGVPILTNEFGFLMQNLQHGESYFLVGIYSIYIFKSIASIPNHVLYQSQHRYEHNSLSSNGKLPFRVSLLALSAPLVSF 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03613 327 SMART HOX_1 21 88 IPR001356 GO:0003677
Spst1g03613 327 MobiDBLite consensus disorder prediction 1 26 - -
Spst1g03613 327 SUPERFAMILY Homeodomain-like 17 90 IPR009057 -
Spst1g03613 327 ProSiteProfiles 'Homeobox' domain profile. 19 84 IPR001356 GO:0003677
Spst1g03613 327 Pfam Homeodomain 23 83 IPR001356 GO:0003677
Spst1g03613 327 FunFam WUSCHEL-related homeobox 11 23 90 - -
Spst1g03613 327 Gene3D - 23 90 - -
Spst1g03613 327 PANTHER WUSCHEL-RELATED HOMEOBOX 11 1 274 IPR044558 GO:0003700|GO:0048830
Spst1g03613 327 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03613 Spst-Chr1 45590174 45592341 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g03613 3 288 Wox Gene Family AT3G03660 48.845 1.14e-64 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Spst1g03613 Homeodomain 1.5e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03613 - - gmx:100791266 346.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03613 1 45590174 45592341 Spst1g03613 1 45590174 45592341 ECH