Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03606 ATGATGTGTGAGAGGTTGGTAGTTGTTGCACCAAATCCCTCACCAGTCACAAACCAATATTCATTCCTTCAAAACCAAAGACCATCACTCCACTCTCTCACCTACCAACAAGGCAGTACCCTTTCTCATACATATCAGTTCTTCATTTTCCTCCTTCTCTATTACCACTGCATCTTTTTTTTCTCCCTCCACACACCCATTTTCCTGTTCACCCTACCTATCATTCAAATCATGGATTTCTTGCATGCTCCAGAAAATCAGGTACTTCTGGCTGTGGCCGTGGCCGCCGTCGCCGTTGGGCTTGGTGCTGTCTTTCTCTTTTCATCTAAGAAGCGCAAAGGTTGCTTGGACCCCGAGAACTTTAAGCAGTTCAAACTTGTTAAGCGTGCACAGCTGAGCCATAATGTTGCAAAGTTCACATTTGCCCTCCCAACACCTACATCTGTTTTGGGTCTTCCAATTGGGCAACACATAAGTTGCAGGGGTAACGATGCACAAGGTGAAGAGGTTGTCAAACCATATACCCCTACAACTCTGGACTCTGATATTGGACATTTTGAACTAGTTATTAAGATGTACCCACAAGGAAGGATGTCCCACCATTTCCGGGAGATGCGTGTTGGTGACTACCTTGCTGTGAAAGGACCCAAGGGACGTTTCAAGTACCAACCTGGGGAGGTTAGGGCATTTGGAATGCTTGCTGGAGGGTCTGGAATCACTCCAATGTTCCAAGTTGCTAGAGCTATATTAGAAAACCCTAATGACAGGACCAAAGTACATCTTGTCTATGCCAATGTTACATATGAGGACATTCTTTTGAAGGAAGAACTTGATGGTCTTGCTTCTAACTATCCAGATCGATTCAAAGTATACTACGTGCTAAATCAGCCTCCGGAGGTGTGGGATGGTGGTGTTGGATTTGTGTCTAAGGAGATGATTCAAGCCCATTGCCCTGCTCCAGCACATGATATTAAGATCTTGAGATGTGGCCCTCCACCTATGAACAAGGCCATGGCTGCACACCTTGAAGCCCTTGAATATTCTCCTGAGATGCAGTTCCAGTTCTGA 1068 0.4551 MMCERLVVVAPNPSPVTNQYSFLQNQRPSLHSLTYQQGSTLSHTYQFFIFLLLYYHCIFFFSLHTPIFLFTLPIIQIMDFLHAPENQVLLAVAVAAVAVGLGAVFLFSSKKRKGCLDPENFKQFKLVKRAQLSHNVAKFTFALPTPTSVLGLPIGQHISCRGNDAQGEEVVKPYTPTTLDSDIGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFKYQPGEVRAFGMLAGGSGITPMFQVARAILENPNDRTKVHLVYANVTYEDILLKEELDGLASNYPDRFKVYYVLNQPPEVWDGGVGFVSKEMIQAHCPAPAHDIKILRCGPPPMNKAMAAHLEALEYSPEMQFQF 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03606 355 Pfam Oxidoreductase NAD-binding domain 232 338 IPR001433 GO:0016491
Spst1g03606 355 Gene3D Translation factors 114 213 - -
Spst1g03606 355 SUPERFAMILY Riboflavin synthase domain-like 115 224 IPR017938 -
Spst1g03606 355 PRINTS Cytochrome B5 reductase signature 150 161 - -
Spst1g03606 355 PRINTS Cytochrome B5 reductase signature 208 222 - -
Spst1g03606 355 PRINTS Cytochrome B5 reductase signature 269 280 - -
Spst1g03606 355 PRINTS Cytochrome B5 reductase signature 231 250 - -
Spst1g03606 355 PRINTS Cytochrome B5 reductase signature 325 333 - -
Spst1g03606 355 PRINTS Cytochrome B5 reductase signature 172 179 - -
Spst1g03606 355 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 231 250 IPR001709 GO:0016491
Spst1g03606 355 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 325 333 IPR001709 GO:0016491
Spst1g03606 355 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 269 280 IPR001709 GO:0016491
Spst1g03606 355 Pfam Oxidoreductase FAD-binding domain 124 222 IPR008333 -
Spst1g03606 355 Gene3D - 214 355 IPR039261 -
Spst1g03606 355 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 119 223 IPR017927 GO:0016491
Spst1g03606 355 FunFam NADH-cytochrome b5 reductase 114 213 - -
Spst1g03606 355 FunFam NADH-cytochrome b5 reductase 213 355 - -
Spst1g03606 355 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 211 351 IPR039261 -
Spst1g03606 355 PANTHER NADH-CYTOCHROME B5 REDUCTASE 110 355 IPR001834 GO:0016491
Spst1g03606 355 CDD cyt_b5_reduct_like 124 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03606 Spst-Chr1 45471193 45478816 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g03606 79 355 NADPH P450 reductases AT5G17770 83.453 9.77e-170 472
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03606 K00326 - gmx:100816447 525.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03606 1 45471193 45478816 Spst1g03606 1 45471193 45478816 ECH