Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03572 ATGGGATCTCAAGGTGGGGCAGTCCAAGAGCCGAAGAGTGGGTCTTTGACAAGGCAAGGGTCTTTGTACAATCTCACCCTTGATGAGGTGCATAACCAGCTTGGAAATTTGGGGAAACCCTTAGGAAGCATGAATCTTGATGAGCTGCTCAAGAGTGTGTGGACTGCTGAATCTGGAATAGATGCATACATGCAGCAAGGTCAGGTGGCTTCTGCTGGGTCATCTTTGAATCCTCAAGGGAGCCTAACATTGTGTGGGGATCTTAGCAAGAAAACTATTGATGAGGTTTGGAGAGATATGCAGCAGAAGAAGAGTGCTAGTCAGGAAAGAGAAAGACAGCCTGCACTGGGTGAGATGACGCTGGAGGATTTCTTGGTGAAGGCTGGTGTGACTACTGAACCTTTCTCTAATGAGGATAGTTCGATGGCCATGTCAGGGGTTGATTCCCAACACAACACATCACAGCATGCTCATTGGCTGCAATACCAGTTCACTTCAGTGCAGCAACAGCCACAACAACAGCATCAGCATCAAAATCAGCAGAATAGTGTGATGCCGGGTTTTTCAGGTTTTATGGCTGTTCAACAGCGTATGCCGGTTATGGTGAATCCGGTTCTGGATGCAGGATACGCCGAAGCAGTTCCATCTTCTTTGATGGGTGCCTTATCAGATTCACAAACAGCAGGTAGGAAAAGGGTTGCCTCCGGTAATGTGGTTGAGAAAACTGTTGAGAGGAGGCAGAAGAGGATGATTAAAAATAGGGAATCCGCCGCGCGGTCCCGGGCTAGAAAACAGGCATACACACAAGAACTGGAGATTAAAGTTTCGCTTTTAGAAGAAGAGAATGAAAGGCTTAGAAGACTGAATGAGATAGAGAAGGTTTTGCCAAGTGCACCACCACCTGATCCTATGCATCAGCTTCGCAGAACTAGTTCAGCTCCCCTTTGA 948 0.4736 MGSQGGAVQEPKSGSLTRQGSLYNLTLDEVHNQLGNLGKPLGSMNLDELLKSVWTAESGIDAYMQQGQVASAGSSLNPQGSLTLCGDLSKKTIDEVWRDMQQKKSASQERERQPALGEMTLEDFLVKAGVTTEPFSNEDSSMAMSGVDSQHNTSQHAHWLQYQFTSVQQQPQQQHQHQNQQNSVMPGFSGFMAVQQRMPVMVNPVLDAGYAEAVPSSLMGALSDSQTAGRKRVASGNVVEKTVERRQKRMIKNRESAARSRARKQAYTQELEIKVSLLEEENERLRRLNEIEKVLPSAPPPDPMHQLRRTSSAPL 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03572 315 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 16 314 IPR043452 GO:0003700|GO:0045893
Spst1g03572 315 MobiDBLite consensus disorder prediction 1 20 - -
Spst1g03572 315 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 243 287 IPR004827 GO:0003700|GO:0006355
Spst1g03572 315 CDD bZIP_plant_BZIP46 245 290 - -
Spst1g03572 315 Pfam bZIP transcription factor 245 288 IPR004827 GO:0003700|GO:0006355
Spst1g03572 315 SUPERFAMILY Leucine zipper domain 245 289 IPR046347 GO:0003700|GO:0006355
Spst1g03572 315 MobiDBLite consensus disorder prediction 292 315 - -
Spst1g03572 315 Coils Coil 268 288 - -
Spst1g03572 315 MobiDBLite consensus disorder prediction 136 155 - -
Spst1g03572 315 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 248 263 IPR004827 GO:0003700|GO:0006355
Spst1g03572 315 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 243 295 - -
Spst1g03572 315 Gene3D - 243 295 - -
Spst1g03572 315 SMART brlzneu 241 309 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03572 Spst-Chr1 44990488 44993903 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g03572 1 315 bZIP Transcription Factor Family AT3G56850 57.716 1.28e-107 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Spst1g03572 bZIP_1 2.6e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03572 K14432 - gmx:100783666 489.574