Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03544 GATTTGGAAATTGTTGGAAAGAGAGCTTGTTTGTCGGATCGAGTTTTCTTCGTTTTGGGAAATCATGATATTGTTGCAAGCTTTATTGTCAATAAATCTGTTTCTTTGCTAGAAGATAACAAATTTCAGCTTGCTGATCAAATTTTTGATGAGATAGATGCTCCCTCTAGCAAAGTAGCTGTGTTGTTTCTAGAAACCTTACCTGGGCCGAACAAGACAAGAGTGGTTTTTGCAGTTGATTCTGACGATAAAGACACAGAAATGTCCTCAGCAGTCATCAGTTTGATAAGAGCATCATTTACATCCCTGGTTATACACCAATCAATTCTCCAGCTTACTTCTTCATCCTTGTTCGGAGATCCCTACTCTTTTGAAGTGCTGAAATTGAAGGGAGGAATTACTATAATTCCACAGCAGAATGCATTTCCTCTGCAGAAAGGGCAAGCAAAATTCAGCTTTAAATTGAATTTCCCCATTTATCAAATACAATCCAATTTTAAGGAGCTGACTAGTCAGCTAAAGTCTGGGTTATATCTGACATCGTTTGAGAACTTGTATATCAGCTTATCGAATTCTGAAGGTTCAACAGTTGATGCTCCTACTCTTGTCCAGTCAACAGTTCTACTTGCAGTTGGGATTACTCCATGGAAAGAGAGGCTAAAGCAATTGGCCCAAACCATCATGGGACCACATAATCTAGGCTTGAATCACACTGAATTTGGTAGGGTTAAGCAGGTCCGACTTTCATCCATCTTGCAACACTCTCTTCACGGCAATGATGGTGGTGGTTCTGCATGGTCACCTGCTCCTGCTCCTCTGCAACATTCTCCACACCATCACCGGCATCATCAACACCAGCATCATCATCATCACCATGAGACTCATCTATCTCCTGCAATTTCTCCCGTGCCCTCTATACCTGTACCTGCACCAACACCTACACCTAGACATGCACATACACATACACCTGCACCTACACCCACACCCAGCAAGGGTGTGACTCCACCCAAGGTTGGTTCTCCTACTGCCGCAGAAAGTGCACCTTCACCAGGGAAAAATTCTCAATCTCAGCCTCCTAATTGCCGGTTTGGTATTAGAAAAAGGTCTACCCATAAGTCTGGGAAGCACGCTCATCCTCCAACACCTGCAGTTGCCCCTATTATAATAAATCCACATCATCCTGTTCCTGCCGCATCACCAAAAATGCATATTGAACCCCCAACTCATGTCTCTCATTCAGTACCTGCCTTGAGTCCTTTGCCGAATGTAGCTTTTGCTCATGCGGAGCCCCCTCCTAAGAATGAACTTGCCCCACAACATTATCACACTCATATTCCTGGGATATCATCATCTTCTGCAGGTTGTCTTGGAACTGTTAAATGGTCATTTTTAATGCTTATAGTACTTGTGTTTAGTGTATAA 1422 0.4297 DLEIVGKRACLSDRVFFVLGNHDIVASFIVNKSVSLLEDNKFQLADQIFDEIDAPSSKVAVLFLETLPGPNKTRVVFAVDSDDKDTEMSSAVISLIRASFTSLVIHQSILQLTSSSLFGDPYSFEVLKLKGGITIIPQQNAFPLQKGQAKFSFKLNFPIYQIQSNFKELTSQLKSGLYLTSFENLYISLSNSEGSTVDAPTLVQSTVLLAVGITPWKERLKQLAQTIMGPHNLGLNHTEFGRVKQVRLSSILQHSLHGNDGGGSAWSPAPAPLQHSPHHHRHHQHQHHHHHHETHLSPAISPVPSIPVPAPTPTPRHAHTHTPAPTPTPSKGVTPPKVGSPTAAESAPSPGKNSQSQPPNCRFGIRKRSTHKSGKHAHPPTPAVAPIIINPHHPVPAASPKMHIEPPTHVSHSVPALSPLPNVAFAHAEPPPKNELAPQHYHTHIPGISSSSAGCLGTVKWSFLMLIVLVFSV 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03544 473 MobiDBLite consensus disorder prediction 346 363 - -
Spst1g03544 473 PANTHER F20B24.21 21 466 - -
Spst1g03544 473 MobiDBLite consensus disorder prediction 254 391 - -
Spst1g03544 473 MobiDBLite consensus disorder prediction 302 334 - -
Spst1g03544 473 MobiDBLite consensus disorder prediction 275 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03544 Spst-Chr1 44652895 44656237 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g03544 22 252 C3H Transcription Factor Family AT3G10810 54.936 3.06e-69 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03544 - - vum:124835776 709.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03544 1 44652895 44656237 Spst1g03544 1 44652895 44656237 ECH