Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03535 ATGGAGATCTTCTCCTTCCTCTTCCTTACCCTTCTCCTCCCTCTCTATCTCTACTTCGCTAGACAAAAGCCCAACCAAACCAACAACAAAGGCTTTAAACACTACCCTCTCATAGGAACCTTACCGGAATTCATCAAAAACCGCCATCGCTTCCTTGAATGGACCACCCAAGTCCTCCGCGACTGCCCCACCAACACCGCCGTCTTCTCCCGCCCCTACAGCATCCACGGCGTCATTACGGCCAACCCCGAAAACGTCCAACACATGCTCAAAACCCAATTCCAAAACTACCCTAAGGGCGAACGCTTCATCCACCACCTCCAAGACTTCCTCGGCAACGGAATCTTTAACTCCGACGGTGAACTCTGGAAGGTGCAGCGAAAAGTTGCCAGCTATGAATTCAGTACCAAATCACTCCGTAACTTCATCGTCAACTCTGTCACCACCGAACTCCATACCAGGCTTCTTCCAATTCTCTCCAAAGCCTCAGAGACAAACAGGGTCCTCGATTTGCAGGACCTGCTCGAGCGCTTCGCCTTCGACAACGTCTGCAAGCTAGCCTTCAATGTTGACCCCGCCTGTCTCGACGGCGACGGCACTGCCGGCGCCGAGTTCATGCGCGCGTTCGAGGACGCCGCCGTGCTGAGTTCAAGGAGGTTCATGAGCGTGTTACCCTTCACGTGGAAACTAAAGAAGCTCTTGAACATCGGAACAGAACGGAGACTAAGAGAATCAATCACGACCGTCCACGTGTTCGCCGACTCGATGATAAGGTCACGATTAGAATCGAGAGAGCCCACCAGCGGCGACGAAGATTTACTTTCGCGTTTCATCAGAACAGAGGACACCTCGCCGGAGTTTCTCCGCGACGTCGTGATAAGTTTCATTCTTGCCGGGCGTGACACGACGTCATCCGCGCTCACCTGGTTCTTCTGGATTCTCTCTTCCAGACCTCACGTGATGAGAAACATTCGCGAAGAAATCGCAAGGGTTCGGTCCGCGACTCGTGGCATTGGCGCGTTCAGTTACGAGGAGCTGAGGGAGATGCATTACCTGCACGCGGCGATTACGGAGACAATGAGGCTATACCCGCCGGTGCCCGTTGACTCGAAGAAGTGTGAGGACGACGACGTTTTGCCGGATGGAACGAGGATTGGGAAGGGGTGGTTCATGTCGTACCACACGTACGCAATGGGGAGGATGGAGAGCGTGTGGGGAAAAGACTGCACGGAATTTAATCCCGAAAGGTGGTTGGAGAATGGCGCCTTCCGACCGGAGAGTCCGTTTCGTTTTCCGGTGTTTCACGCAGGTCCCCGAACGTGTCTTGGCAAAGAAATGGCTTATATTCAGATGAAGTCGATCGCAGCTTCCGTGGTGGAGAGTTTTGAGATTGAGCCACTCGATAAAGACACGTGTCCTGAGCACGTTTTGTCTTTGACTTTAAGGATGAAGGGAGGGTTGGCAGTGATGGTAAGGAGAAGGGATACATAA 1491 0.5305 MEIFSFLFLTLLLPLYLYFARQKPNQTNNKGFKHYPLIGTLPEFIKNRHRFLEWTTQVLRDCPTNTAVFSRPYSIHGVITANPENVQHMLKTQFQNYPKGERFIHHLQDFLGNGIFNSDGELWKVQRKVASYEFSTKSLRNFIVNSVTTELHTRLLPILSKASETNRVLDLQDLLERFAFDNVCKLAFNVDPACLDGDGTAGAEFMRAFEDAAVLSSRRFMSVLPFTWKLKKLLNIGTERRLRESITTVHVFADSMIRSRLESREPTSGDEDLLSRFIRTEDTSPEFLRDVVISFILAGRDTTSSALTWFFWILSSRPHVMRNIREEIARVRSATRGIGAFSYEELREMHYLHAAITETMRLYPPVPVDSKKCEDDDVLPDGTRIGKGWFMSYHTYAMGRMESVWGKDCTEFNPERWLENGAFRPESPFRFPVFHAGPRTCLGKEMAYIQMKSIAASVVESFEIEPLDKDTCPEHVLSLTLRMKGGLAVMVRRRDT 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03535 496 Gene3D Cytochrome P450 15 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03535 496 FunFam Cytochrome P450 23 496 - -
Spst1g03535 496 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
Spst1g03535 496 Pfam Cytochrome P450 31 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03535 496 PANTHER CYTOCHROME P450 21 488 - -
Spst1g03535 496 SUPERFAMILY Cytochrome P450 31 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03535 496 CDD CYP86A 77 487 - -
Spst1g03535 496 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03535 496 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03535 496 PRINTS P450 superfamily signature 441 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03535 496 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03535 496 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03535 496 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03535 496 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03535 496 PRINTS E-class P450 group I signature 353 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03535 496 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03535 496 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03535 Spst-Chr1 44511134 44512624 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g03535 25 494 Cytochrome P450 AT3G56630 60.632 0.0 617
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03535 - - pvu:PHAVU_001G118600g 870.537