Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03525 ATGACTGAGTCAATGCACGCCGTGGAACCGACGCCTGAGGCGGCGGAGCTCCCGGCGCCTGATCCCTTGTTTGATGAATTCTCCGCCGAATTCGGATCCCTCCCCCTCCTGTCCATGGACTCTCTCTTCAACTCTGACGCGCTTCCATTCGCCTCAGATCTTGATTTTGGCATGGATTTTGATGATAATAATGGAGAATTCGAAATCACCTTCGACGATCTCGACGACATCTGCATCCCCTCAGACACTGAGGATTTCCTTCTCCCTGACGCATGTAACCCCAACAGCACCTCTGTTTTGCCGCCAATTGAGGAATCTTCCCCGAAGAATTTCGATTCTCCGCGTTCTGACGCATCTGTCGTTTCTGGAGATCGGAGCTCCGGCGTTTCTAGGTTTTTCAATTCGCAAGCGTCCGAGTCAATTTCTGAGGGTAGTTCGAGCAAAGAGGGTTCGCATGATGCGGTTGATGTTAGGGTTTCAAACACTCCATCGCCGGAGTCTGAATTTTGCGACCGGGAGGAGTCGTCTCATGGACCGGTTTCGTCTCAGGGTTCAGGAAACGGTGGATCGGGTGTATATGAGACCATGAACTCGCCCTCACCTGATTCTGGATCTTCCGAGAGGGACATAACATGGTCTCGTGCACATGCAGGTATGGATAAGGGTGTGAAATTGGAGGAAATTCCTGGGTGTGATCTGAAGAGGAAGAAAGAGAGATGTGAAGGAAATGCTACCAAGCACAGACGGTTCTCGTCCTCCTCTGTGGAGAATAAGATCGAGAAACAGTCTCCATCTGATGTGAATGCAATTGATGATGATGATGAAAAAAGGAAGGCACGGTTAATGAGGAATAGGGAAAGTGCTCAGCTTTCTAGGCAGAGGAAGAAGCATTATGTGGAGGAGCTTGAGGAGAAAGTGAGATCAATGAATTCCATCATTGCTGATCTGAGTAGTAAGATTTCATATATGGTGGCTGAGAATGCTACACTTAGACAGCAAGTGGGAGCTGGTGTGATGTGTGCTCCTCCACCACCTGCTCCTGGGATGTATCCTCATCCTCCAATGCCTCCCATTCCTTATCCGTGGATGCCTTGTGCTCCCTATGTTGTCAAGCCTCAAGGATCTCAGGTTCCTTTAGTACCCATTCCTAGGTTGAAGCCTCAGCAACCTGCTTCAGCCGCCAAGGGTAAAAAGTCTGAGAGTAAGAAGAGTGAGGGAAAAACTAAGAAGGTTGCTAGTATTAGTTTCTTGGGTTTGTTTTTCTTTATCATGCTTTTTGGTGGGCTTGTTCCTCTAGTGGATTTTAAGTTTGGGAGTTTAGTGGACAATGTTCCTGGTACTGGTATGTCTAGCTATGTTAGTGATAGGGTGTATGGTCATGGTGGAGGGAAGGTTTGGTCTGTGAATGGTCCTAGGAATGGATCTGAAAGAGATGAGGAAGTAGGGTTTTCTAATGAGAGGTTTCGTGTTAAAGACAGAATGAATTACGAGACGGGCCGGCAATTAGGAGAAGAGAAGGGTGAACGGCAGGGCCCTGATGATTTTGGTCGCCAAGGAAATGCCAGCGAGCCTCTTGTTGCTTCATTGTATGTTCCTAGGAATGATAAGATGGTGAAGATTGATGGGAACTTGATTATCCATTCCATTATGGCCAGTGAGAAAGCTATGGCATCTCAAACTGCCGAGGCAAAGAAGGAGAAGAAAGAAACAGGTTTGGCCATTCCTAAGGATTGGGATTCTGCGTTGGCTATTCCTGAAGTTGCAAGAAAAAGAGGTCAACATCCACATGTCTATAGGGTTCCTTCTGAACAAAGGAAAGCTCTTGGCTCTGGTTCAACCAAAGCTTTGAAGGACCATATGAAGTCCTCTGCAACTGATGGTAAAATGCAACAGTGGTTCCGTGAAGGCCTTGCAGGACCAATGTTAAGCTCTGGCATGTGCACTGAAGTTTTCCAGTTTGATGTCTCTCCGAGTCCTGGAGCTATAGTTCCTGCAACATCAGTAGCCAATGTCTCTAAGGAAAAGCGTCAGAATGCTACCTCCGTCAAAAAGACGGGGAATAGAAGAACCCTTCATGGGTTTCCCGATTCTCTTACTGGATCTAATGTGAACATAACTGAAGAACATGTAAAAAACTTGCAGAAAGACCTCCTCCGTGGTAATGAATCTTCAATGGTCGTTTCAGTCCTTGTTGATCCCAAAGAGGCTGGTGATGATGTTGATGTTGATGGCATGATGAGACCAAAGTCACTCTCTCGGATTTTCGTGGTTGTGCTAATTGATAGTGTGAAGTATGTCACTTACTCATGCGGTCTGCCTCGTGCTTCTCCCCATTTAGTAACTTCTTATGTATGA 2355 0.4679 MTESMHAVEPTPEAAELPAPDPLFDEFSAEFGSLPLLSMDSLFNSDALPFASDLDFGMDFDDNNGEFEITFDDLDDICIPSDTEDFLLPDACNPNSTSVLPPIEESSPKNFDSPRSDASVVSGDRSSGVSRFFNSQASESISEGSSSKEGSHDAVDVRVSNTPSPESEFCDREESSHGPVSSQGSGNGGSGVYETMNSPSPDSGSSERDITWSRAHAGMDKGVKLEEIPGCDLKRKKERCEGNATKHRRFSSSSVENKIEKQSPSDVNAIDDDDEKRKARLMRNRESAQLSRQRKKHYVEELEEKVRSMNSIIADLSSKISYMVAENATLRQQVGAGVMCAPPPPAPGMYPHPPMPPIPYPWMPCAPYVVKPQGSQVPLVPIPRLKPQQPASAAKGKKSESKKSEGKTKKVASISFLGLFFFIMLFGGLVPLVDFKFGSLVDNVPGTGMSSYVSDRVYGHGGGKVWSVNGPRNGSERDEEVGFSNERFRVKDRMNYETGRQLGEEKGERQGPDDFGRQGNASEPLVASLYVPRNDKMVKIDGNLIIHSIMASEKAMASQTAEAKKEKKETGLAIPKDWDSALAIPEVARKRGQHPHVYRVPSEQRKALGSGSTKALKDHMKSSATDGKMQQWFREGLAGPMLSSGMCTEVFQFDVSPSPGAIVPATSVANVSKEKRQNATSVKKTGNRRTLHGFPDSLTGSNVNITEEHVKNLQKDLLRGNESSMVVSVLVDPKEAGDDVDVDGMMRPKSLSRIFVVVLIDSVKYVTYSCGLPRASPHLVTSYV 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03525 784 MobiDBLite consensus disorder prediction 380 407 - -
Spst1g03525 784 MobiDBLite consensus disorder prediction 1 20 - -
Spst1g03525 784 Coils Coil 299 319 - -
Spst1g03525 784 Gene3D - 274 336 - -
Spst1g03525 784 MobiDBLite consensus disorder prediction 496 513 - -
Spst1g03525 784 MobiDBLite consensus disorder prediction 97 211 - -
Spst1g03525 784 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 274 334 IPR004827 GO:0003700|GO:0006355
Spst1g03525 784 SMART brlzneu 272 336 IPR004827 GO:0003700|GO:0006355
Spst1g03525 784 CDD bZIP_HY5-like 277 328 - -
Spst1g03525 784 MobiDBLite consensus disorder prediction 241 255 - -
Spst1g03525 784 PANTHER BASIC-LEUCINE ZIPPER TRANSCRIPTION FACTOR F-RELATED 54 779 - -
Spst1g03525 784 SUPERFAMILY Leucine zipper domain 276 334 IPR046347 GO:0003700|GO:0006355
Spst1g03525 784 MobiDBLite consensus disorder prediction 496 521 - -
Spst1g03525 784 MobiDBLite consensus disorder prediction 241 270 - -
Spst1g03525 784 Pfam bZIP transcription factor 276 334 IPR004827 GO:0003700|GO:0006355
Spst1g03525 784 FunFam bZIP transcription factor 49 275 337 - -
Spst1g03525 784 MobiDBLite consensus disorder prediction 112 148 - -
Spst1g03525 784 MobiDBLite consensus disorder prediction 176 210 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g03525 29 782 bZIP Transcription Factor Family AT2G40950 47.860 6.78e-169 503
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Spst1g03525 bZIP_1 9e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03525 K25783 - gmx:100101871 1090.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03525 1 44385568 44388380 Spst1g03525 1 44385568 44388380 ECH