Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03522 ATGGAATTTTCTGAAATCAGTCTGCATCAAAGAGTTAATGTCACTGTCATAGCTGCTACAAATAGGCCAGACAAGATTGACCCTGCCCTTTTAAGGCCAGGACGCTTTGACCGTCTGCTATATGTTGGACCTCCGAATGAGGTGGATAGGGAAGAGATATTTCGCATTCATCTGCGTAAAATCCCATGTGGTTCTGATGTTAGCCTTAAAGAACTATCTCTACTCACAGATGGTTGTACTGGGGCTGACATATCATTGATATGTCGGGAGGCAGCTGTTGCAGCAATTGAGGAAAGCCTTGATGTTTCAGCTATAACAATGAAGCATTTAAAGATGGCAATCAAACAGATCCAGCCATCAGAAGTTCACTCCTATCAAATGCTGTCAACAAAATTTCAAAGGGCCGTCCACTCCTGTGATATAAAGGATGAATTCAATATGCAGTGCGAAAGTAAATCTACCCAGCTCAACATCTGGTAG 480 0.425 MEFSEISLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNEVDREEIFRIHLRKIPCGSDVSLKELSLLTDGCTGADISLICREAAVAAIEESLDVSAITMKHLKMAIKQIQPSEVHSYQMLSTKFQRAVHSCDIKDEFNMQCESKSTQLNIW 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03522 159 Gene3D - 46 129 - -
Spst1g03522 159 Pfam ATPase family associated with various cellular activities (AAA) 12 43 IPR003959 GO:0005524|GO:0016887
Spst1g03522 159 ProSitePatterns AAA-protein family signature. 14 32 IPR003960 GO:0005524|GO:0016887
Spst1g03522 159 Pfam AAA+ lid domain 66 111 IPR041569 -
Spst1g03522 159 FunFam spermatogenesis-associated protein 5-like protein 1 45 129 - -
Spst1g03522 159 Gene3D - 3 45 IPR027417 -
Spst1g03522 159 PANTHER AAA-FAMILY ATPASE 10 133 - -
Spst1g03522 159 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 123 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03522 Spst-Chr1 44341198 44345053 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g03522 7 156 Calmodulin-binding Proteins AT3G56690 68.667 4.71e-65 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03522 - - gmx:100788600 277.715