Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03520 ATGGCATCAAGAGCAATAGTTCAACAACAAGCCAGAGGCGAAGATGTAATTGGGGGAGGAAAGCAGCAGAAGAAGAACGGTGTAGCGGATGGAAAGAATCGCAAGGTGTTGGGTGATATTGGGAATTTGGCCAATGTAAGAGGAGTTGAAGTCAAGCCTCATCGCCCCATCACAAGGAGTTTTGGTGCCCAACTACTTGCCAATGCACAAGCCGCAGCAGTTGTTGAGAATAACAAGAAACAAGCTTGTGCTAATGTCGCTGGTCCTGCTCCTGTTGCCGTGGCCAAGAGAGTCCCCAAGCCGGCTCAGAAGAGAGTTACTGTTAAACCAAAACCTGAGGAAGTCATTGACATTGAAGATAGTCCAGTGAAGGAGGTCCAGCAAGACAAGAAAAAGGAAGGAAATGCCAAGTCCAAGAAGAAATCACAAGCTTATACTTCAGTGCTGACCGCTAGAAGCAAGGCAGCATGTGGCATAACCAACAAACCAAAGGTGAATATTATTGACATTGATGCCAGTGATGTTGACAACGAACTTGCTGCTGTGGAGTATATTGATGAAATTTACAAGTTCTATAAACTTGTTGAGCACGAAAGCCGCCCCCATTACTACATAGATTCACAGCCTGAGATAAATGAGAAGATGAGAGCTATTCTGGTTGATTGGCTGATAGATGTCCACAGCAAGTTTGAACTTTCACTTGAGACCCTTTACCTGACCATCAATATAATCGATCGATTCCTATCTGTGAAGACTGTTCCAAGGCGGGAGCTGCAATTGGTTGGCATCAGTGCCATGCTGATGGCATCGAAGTATGAAGAAATCTGGCCACCTGAGGTTGATGACTTTGTCCGCCTCTCAGATAGGGCTTACACTCATGAACAGATACTTGTTATGGAGAAAATCATACTGGGAAAGTTGGAATGGACGTTGACTGTTCCCACACCTTATGTCTTCCTTGTGCGTTTTATCAAGGCATCAGTCCCAGATCAAGAGTTGGAAATCATGACTCATTTTCTGTCTGAGTTGGGATTGATGCACTATGACACCTTGATGTATAGCCCATCAATGGTTGCTGCCTCAGCAGTCTTTGCAGCTAGATGCACTCTGAATAAGACTCCCCTTTGGAATGAGACACTTAAGCTGCACACGGGTTACTCACAAGAACAACTTATGGATTGTGCTAGACTATTGGTGAGTTTCCACTCCACTGTTGGGAATGGAAAGCTTAAGGTTGTGTTCAAAAAGTATTCTGATCCTCAGAAGGGAGCTGTTGCTGCGCTCCCACCAGCTAAATATCTTCTGCCAGAAGGTGTTGTATCCCAACAGAGTTAG 1335 0.4502 MASRAIVQQQARGEDVIGGGKQQKKNGVADGKNRKVLGDIGNLANVRGVEVKPHRPITRSFGAQLLANAQAAAVVENNKKQACANVAGPAPVAVAKRVPKPAQKRVTVKPKPEEVIDIEDSPVKEVQQDKKKEGNAKSKKKSQAYTSVLTARSKAACGITNKPKVNIIDIDASDVDNELAAVEYIDEIYKFYKLVEHESRPHYYIDSQPEINEKMRAILVDWLIDVHSKFELSLETLYLTINIIDRFLSVKTVPRRELQLVGISAMLMASKYEEIWPPEVDDFVRLSDRAYTHEQILVMEKIILGKLEWTLTVPTPYVFLVRFIKASVPDQELEIMTHFLSELGLMHYDTLMYSPSMVAASAVFAARCTLNKTPLWNETLKLHTGYSQEQLMDCARLLVSFHSTVGNGKLKVVFKKYSDPQKGAVAALPPAKYLLPEGVVSQQS 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03520 444 SMART Cyclin_C_2 314 431 IPR004367 -
Spst1g03520 444 CDD CYCLIN_AtCycB-like_rpt2 314 430 - -
Spst1g03520 444 SMART cyclin_7 221 305 IPR013763 -
Spst1g03520 444 SMART cyclin_7 318 400 IPR013763 -
Spst1g03520 444 MobiDBLite consensus disorder prediction 1 34 - -
Spst1g03520 444 MobiDBLite consensus disorder prediction 123 143 - -
Spst1g03520 444 Gene3D - 187 427 - -
Spst1g03520 444 FunFam G2/mitotic-specific cyclin-1 309 426 - -
Spst1g03520 444 Pfam Cyclin, N-terminal domain 187 311 IPR006671 -
Spst1g03520 444 FunFam G2/mitotic-specific cyclin 200 308 - -
Spst1g03520 444 Gene3D - 201 312 - -
Spst1g03520 444 SUPERFAMILY Cyclin-like 313 433 IPR036915 -
Spst1g03520 444 PIRSF Cyclin_A_B_D_E 1 444 IPR046965 GO:0016538|GO:0044772
Spst1g03520 444 PANTHER CYCLINS 137 419 IPR039361 -
Spst1g03520 444 CDD CYCLIN_AtCycB-like_rpt1 167 309 - -
Spst1g03520 444 Pfam Cyclin, C-terminal domain 314 430 IPR004367 -
Spst1g03520 444 ProSitePatterns Cyclins signature. 216 247 IPR006671 -
Spst1g03520 444 MobiDBLite consensus disorder prediction 123 139 - -
Spst1g03520 444 SUPERFAMILY Cyclin-like 176 311 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03520 Spst-Chr1 44312811 44315110 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g03520 1 435 Core Cell Cycle Gene Families AT4G37490 54.746 9.67e-151 433
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03520 K21777 - gmx:547919 684.485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03520 1 44312811 44315110 Spst1g03520 1 44312811 44315110 ECH