Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03483 ATGGACGAAGATGCTAACGAAGAACATCACGATATAGAAAATGTTGATTATGAGACTAGTAATCAATATGACAGCGACAATGAGGGGAATCGTAGAGCATTTCCTCAATCTTCTTTCGTTTCTCAACAGTGGCCTCAAACTTACAGAGATGCCATTGATTCTTACACAATTTCTGCTGCTCCAAATCTTGAATCAATTATACGAGCACCAAGTGTTCTTTATTCAAGCTTTATCGGTGGTCCTTCAAAGAGTATCTTAGAAAGTGATGAAAAGACATCTTTTCTATCTGCTGAGGAACTCGCTCATGCAGGGATCATTAGAAGACAATCAACATGGTGGGAGAAAGCTTCAGTTCAGATGCAAATTCCTGAAGAATTACCTGTTGGTTATGGATGTACCCTCAGTCAAACAATATTTAATGGGATTAATGTGATGGCTGGAGTTGGCCTTCTTTCAACACCGTACACAGTGAAACAAGCTGGGTGGGCAAGTATGATTGTGATGCTTTTCTTTGCAATTGTTTGTTGTTATACAGCAGACCTTATGAAACACTGTTTTGAAAGCAAAGAAGGAATCATTAGCTACCCTGATATAGGAGAAGCTGCATTTGGAAGATATGGTCGACTTATTATATCATCATATTGTGTGGAGTTTATCATCTTGGAAGGAGATAACCTCACTGGATTGTTTCCGGGAACAACCTTACACTTAGGGAGTCTTCAGTTGGACTCCAAACACTTGTTTGCAATTTTAACTGCACTTATTATTCTCCCTACTGTTTGGTTAAAGGATCTTCGCATAATCTCTTATCTCTCAGCTGGAGGGGTTTTATCTACTACTCTGATTATTCTGTGTATGTTTCTTGTCGGGGCAACAACAGATGATGTTGGATTCCACCACAATGGTCCATTAATGAAGTGGAGTGGCCTTCCTTTTGCTTTTGGTGTTTATGGGTTTTGCTTTGCAGGACATTCAGTTTTTCCAAACCTTTATCAGTCCATGGCTAACAAAAAAGAATTTACCAGGGCAGTGATTTCAAGTTTTATTCTATGTGTATTTGTATATGGTAGCTCAGCAATCATGGGATTCCTCATGTTTGGTGAAGGGACTTTGTCTCAAATAACATTGAATTTACCACGAGATGCATTAGCTTCCAGAGTTGCATTGTGGACAATAGTAAGATGCTAA 1188 0.3897 MDEDANEEHHDIENVDYETSNQYDSDNEGNRRAFPQSSFVSQQWPQTYRDAIDSYTISAAPNLESIIRAPSVLYSSFIGGPSKSILESDEKTSFLSAEELAHAGIIRRQSTWWEKASVQMQIPEELPVGYGCTLSQTIFNGINVMAGVGLLSTPYTVKQAGWASMIVMLFFAIVCCYTADLMKHCFESKEGIISYPDIGEAAFGRYGRLIISSYCVEFIILEGDNLTGLFPGTTLHLGSLQLDSKHLFAILTALIILPTVWLKDLRIISYLSAGGVLSTTLIILCMFLVGATTDDVGFHHNGPLMKWSGLPFAFGVYGFCFAGHSVFPNLYQSMANKKEFTRAVISSFILCVFVYGSSAIMGFLMFGEGTLSQITLNLPRDALASRVALWTIVRC 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03483 395 Gene3D Amino acid/polyamine transporter I 132 393 - -
Spst1g03483 395 PANTHER OS05G0424000 PROTEIN-RELATED 141 389 - -
Spst1g03483 395 MobiDBLite consensus disorder prediction 18 38 - -
Spst1g03483 395 Pfam Transmembrane amino acid transporter protein 134 383 IPR013057 -
Spst1g03483 395 MobiDBLite consensus disorder prediction 1 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03483 Spst-Chr1 43784672 43787386 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g03483 3 393 Amino Acid or Auxin Permease AAAP Family AT2G41190 54.717 1.95e-157 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03483 K15015 - gmx:100790344 541.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03483 1 43784672 43787386 Spst1g03483 1 43784672 43787386 ECH