Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Spst1g03450 | ATGAAGGTTGAATTTGAAGGCAGCCAGAGTGATTGTGGTGAATCGCAGGGAGTGTCTGGGACAGATGAATCTGTGTCCACCCAGCAAGAAAGTAGAAGATTGGAATCCAAGAAGAAACTGAAGAAAGTGCGGTCAATAAGGCTTGTAAGATTGCCAAGCAAGAGATCATTCACTAGAGGCAGACCCCAATATGATCATCTCTCCTTTCTCTCAACAGTTAGCACAGAAAGTTCAGAGGGGCAAACACCACTTGACATGGCAGATGCTTCACCCAGAAAGGTTTCTGCAAGGACTGAACCAAAGAGAAAACTGAAGTCCTCTAGATCAATCAAGCTTGCAACTGTCAAGGGCCAAAAGTCAACAAGAAAGTCATCTGAATCTAGTTATGGCAGTGGTGACCAGAATTGGAGGAGTGCAAGTGATTCTGGTAACAAAACCCAGAGAGTCATTACCAGAAGATTAAGCTTGAAGCCTGTGAGGATCTTAGCAAAGATTCCCACTTTCAAATCAAATAACTCTTCCATGGAGAGGGGCCATCAGATATCTCAATCCCCAGACACAAGCTTGCTTAGAGCCACTTGTTCTTCAGCTCTGAAGGATTCCCATTTTCCTGATAACATTGACATCCCTCAAGAGGAAAGTGACTCTCAAGGAGTATCAGCTGTTGTGAAGGTTTGCCCATATTCTTACTGCTCACTTCATGGTCACCGCCATGGGAATCTGCCTCCATTGAAGCGCTTTGTGTCAATGAGGAGGCGCACGTTGAAGAGCGAAAAGCCAACGAAAATGGATCATCAACATGTTACTAAATCAAATCAGAATGGTAATGCAAAGAAAGCCACTCGGAAAACTCAAACTGTCCACACTAAAGGTGCCAAATCTCATTCTCAGAACAAGAAAAAGCTGACAAGGGACTCATCCATTAGGCCTCATGACAGTCCAGACTCCACAGTTACTGATAGTGTGGAATCAACATCAACAGATGTAGTTCAGCTTTCTGCTCCTGATATTGAGATATTGGAGGGAGAAGTGACCAATACGGACAAAAGTATGGAGCCAGATTATGAAGTACTGGAGGTGAGTTCTGTAAAGAAAGAGTCTACACATGCTAGCACTACTGATATGGCAGGTGGGGAAAAAGATAAAAAGTATGGTAACATGTGGAAGTTGGTTTACAAGCATGCTGTATTAAGTGACACAGGGAAATGTGAAAAGAAGCAGTCCTTTGATGAGAAGGACAAGGAAGGCAGAGAGCAAGATTCCCTTGCAACTAATGAAGTGAACAACTCTTATTGTCGTGATAATTGCGACACAGATCAGGATATCGATGATGAAAATAAGAATGTAGTAGAGCTGGTGCAGAAAGCATTTGATGAAATTCTTCTCCCAGAGCCTGAAGACCTCTTTTCTGATGATAATTTCAAATCTGAAGGCGCTGATTCAGATGAGGTACTCTTAGCAAAGAGTGAAGGCAAGAGTGTATCTCCAGTAGCACAGAGGATAGGGACCAAATCTGACCAAAGAGCACCAAAAAGCTGGAGCAATCTGAAAAAGTTAATCCTCTGGAAAAGGTTTGTAAAGGCATTAGAGAAGGTGAGAAATATCCAGCCCCAAAGACCAATACGTTTTCCTTCTAATGCTAACTTCGAAATAGAAAAAGTTTTTCTTAAGCACCAAACAGCCGAAGACAAAAAGAATGATGAGGAATGGATGCTTGACTATGCACTTCAAAAGGTTATTTCTAAGCTTGCACCTGCTCAAAGACGAAGAGTGACACTTCTAGTAGAAGCTTTCGAAACAATTCAGCCATTTCAAGATGTTGAAAATAGTCCACGATTATCTGCAACATCGGAGCCTCGAGCAAATTCAATTCAATCCCTTGACAATTCCTCAAATCATAGCAAGGAAGAAGCATCACTTTCTCATAATAATACCATGGAACTGGCAGATAGTGGTGGTGATGATCCAATGATAGAACTGCACAACCCTACTATGCTCAAAGAAAGATGTCTCGACCATCCTGAGACCGAGACAGTCAATTTTATGCCTGCATTTGGAGATATTGCAGAAGACATAAATGGAAAGCAATGTTTAACTAGCAGTTATGATAATGAGAATAAGTTATCAAGTGACAATGATAATACTTTTGTTGGAGAGATCAAAGATACCAGATCAAATTCCTTAAATATGCCAGCTGATTTTATAAGAAGCAGTCACGTGGAGGCTACACCCAATGCAACAGTCAATGATGTTTCAGAAGACTTGCTGTTCAGTTTGAATACAGAAAATCATCATATCAAATATGAGTCACCGGGAAGAGATGTTGAAACCAAGAATCTGATTGCTGACAATGGGGAAAAGCTTTCTATTTCTAAAAGTTTAATCCTAGAAGGTCTAGTTAGATCACTCAGATCTAATTTGATTGGTTCAGGAGCACCTGCAAACCTATCAGATGAATCAACAGCTGACGAAAACAAAGGAAATGAAAAAGTTAAGTTTGGAACCGAGACTATTGAAGAGTTCCCTACAAAGGAACAATCGAAAGCTCCTACGAGTGCTGTTGTAGAACCTGAGACCCCAGTGGAGAAACAGAACAACACAGGATTGTGGTACTTGGTATATAAACACATGGTATCAAATATGGCTGAAAACAATTCTAAGTCACTAATTGGTGAGGGAGATGAGAAAGAGTCAGCATTTGATGGAAGCAGAACACAAGAATCTTCTATCTCCAGTGAAAGTACACCTTTTACTGATCAAGACATGCAATTCAAGGACCATGCTGTAGCTGATCCAGAAGTTGCACTCCAACAGATTGAAGCCATCAAGATGGTAGAAGAAGCAATTGATTCAATTCTTCCAGATGATCAGGATGACTTAGCAGACAAGGAGTCACTCACTGGCAACACAATATCAGACAACTCCAAACAATCTGACAGAACTGAAAGAGTGTACAGAGAAGGCCTGAACCAAAAAGAAGAAAAGATGGAATCTGACAATGGAACAATCCAAGAACAAAAAGAAGAATCAGCACCAAAGGAACAAGACAGAACAAGCCAGCCATTGTCGAGAAGCTGGAGCAATCTTAAAAAAGTGATCCTGCTTAGAAGATTCATCAAGTCATTGGAAAAAGTTAGGAAATTCAACCCAAGAGGGCCCAGATATCTACCTCTAGAGCCTGATTCAGAAAATGAAAAAGTTAATTTAAGGCATCAAGACATGGAAGAAAGAAAAGGCACTGAAGAATGGATGCTTGATTATGCACTTCGACAGGTTGTTTCCAAATTAACCCCGGCTAGGAAAAGAAAAGTGGAGCTGCTAGTGGAAGCTTTTGAAACAGTCATTCCAACCATTAAAAATTGA | 3363 | 0.4089 | MKVEFEGSQSDCGESQGVSGTDESVSTQQESRRLESKKKLKKVRSIRLVRLPSKRSFTRGRPQYDHLSFLSTVSTESSEGQTPLDMADASPRKVSARTEPKRKLKSSRSIKLATVKGQKSTRKSSESSYGSGDQNWRSASDSGNKTQRVITRRLSLKPVRILAKIPTFKSNNSSMERGHQISQSPDTSLLRATCSSALKDSHFPDNIDIPQEESDSQGVSAVVKVCPYSYCSLHGHRHGNLPPLKRFVSMRRRTLKSEKPTKMDHQHVTKSNQNGNAKKATRKTQTVHTKGAKSHSQNKKKLTRDSSIRPHDSPDSTVTDSVESTSTDVVQLSAPDIEILEGEVTNTDKSMEPDYEVLEVSSVKKESTHASTTDMAGGEKDKKYGNMWKLVYKHAVLSDTGKCEKKQSFDEKDKEGREQDSLATNEVNNSYCRDNCDTDQDIDDENKNVVELVQKAFDEILLPEPEDLFSDDNFKSEGADSDEVLLAKSEGKSVSPVAQRIGTKSDQRAPKSWSNLKKLILWKRFVKALEKVRNIQPQRPIRFPSNANFEIEKVFLKHQTAEDKKNDEEWMLDYALQKVISKLAPAQRRRVTLLVEAFETIQPFQDVENSPRLSATSEPRANSIQSLDNSSNHSKEEASLSHNNTMELADSGGDDPMIELHNPTMLKERCLDHPETETVNFMPAFGDIAEDINGKQCLTSSYDNENKLSSDNDNTFVGEIKDTRSNSLNMPADFIRSSHVEATPNATVNDVSEDLLFSLNTENHHIKYESPGRDVETKNLIADNGEKLSISKSLILEGLVRSLRSNLIGSGAPANLSDESTADENKGNEKVKFGTETIEEFPTKEQSKAPTSAVVEPETPVEKQNNTGLWYLVYKHMVSNMAENNSKSLIGEGDEKESAFDGSRTQESSISSESTPFTDQDMQFKDHAVADPEVALQQIEAIKMVEEAIDSILPDDQDDLADKESLTGNTISDNSKQSDRTERVYREGLNQKEEKMESDNGTIQEQKEESAPKEQDRTSQPLSRSWSNLKKVILLRRFIKSLEKVRKFNPRGPRYLPLEPDSENEKVNLRHQDMEERKGTEEWMLDYALRQVVSKLTPARKRKVELLVEAFETVIPTIKN | 1120 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Spst1g03450 | 1120 | MobiDBLite | consensus disorder prediction | 888 | 918 | - | - | |
Spst1g03450 | 1120 | MobiDBLite | consensus disorder prediction | 111 | 148 | - | - | |
Spst1g03450 | 1120 | SMART | CaM_binding_2 | 992 | 1116 | IPR012417 | GO:0005516 | |
Spst1g03450 | 1120 | SMART | CaM_binding_2 | 490 | 603 | IPR012417 | GO:0005516 | |
Spst1g03450 | 1120 | MobiDBLite | consensus disorder prediction | 403 | 426 | - | - | |
Spst1g03450 | 1120 | MobiDBLite | consensus disorder prediction | 403 | 421 | - | - | |
Spst1g03450 | 1120 | MobiDBLite | consensus disorder prediction | 267 | 282 | - | - | |
Spst1g03450 | 1120 | MobiDBLite | consensus disorder prediction | 903 | 918 | - | - | |
Spst1g03450 | 1120 | MobiDBLite | consensus disorder prediction | 9 | 27 | - | - | |
Spst1g03450 | 1120 | MobiDBLite | consensus disorder prediction | 842 | 861 | - | - | |
Spst1g03450 | 1120 | Pfam | Plant calmodulin-binding domain | 1013 | 1116 | IPR012417 | GO:0005516 | |
Spst1g03450 | 1120 | Pfam | Plant calmodulin-binding domain | 504 | 602 | IPR012417 | GO:0005516 | |
Spst1g03450 | 1120 | MobiDBLite | consensus disorder prediction | 844 | 861 | - | - | |
Spst1g03450 | 1120 | MobiDBLite | consensus disorder prediction | 72 | 148 | - | - | |
Spst1g03450 | 1120 | MobiDBLite | consensus disorder prediction | 1 | 43 | - | - | |
Spst1g03450 | 1120 | MobiDBLite | consensus disorder prediction | 256 | 339 | - | - | |
Spst1g03450 | 1120 | Coils | Coil | 989 | 1009 | - | - | |
Spst1g03450 | 1120 | PANTHER | CALMODULIN-BINDING PROTEIN-RELATED | 651 | 1116 | IPR044681 | GO:0005516 | |
Spst1g03450 | 1120 | MobiDBLite | consensus disorder prediction | 976 | 1015 | - | - | |
Spst1g03450 | 1120 | MobiDBLite | consensus disorder prediction | 312 | 332 | - | - | |
Spst1g03450 | 1120 | MobiDBLite | consensus disorder prediction | 810 | 830 | - | - | |
Spst1g03450 | 1120 | MobiDBLite | consensus disorder prediction | 92 | 106 | - | - | |
Spst1g03450 | 1120 | MobiDBLite | consensus disorder prediction | 283 | 297 | - | - | |
Spst1g03450 | 1120 | MobiDBLite | consensus disorder prediction | 955 | 1023 | - | - | |
Spst1g03450 | 1120 | MobiDBLite | consensus disorder prediction | 608 | 641 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Spst1g03450 | Spst-Chr1 | 43262748 | 43266110 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Spst1g03450 | 387 | 639 | Calmodulin-binding Proteins | AT5G04020 | 34.109 | 1.42e-24 | 109 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Spst1g03450 | - | - | gmx:100804484 | 1533.08 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Spst1g03450 | 1 | 43262748 | 43266110 | Spst1g03450 | 1 | 43262748 | 43266110 | ECH |