Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03450 ATGAAGGTTGAATTTGAAGGCAGCCAGAGTGATTGTGGTGAATCGCAGGGAGTGTCTGGGACAGATGAATCTGTGTCCACCCAGCAAGAAAGTAGAAGATTGGAATCCAAGAAGAAACTGAAGAAAGTGCGGTCAATAAGGCTTGTAAGATTGCCAAGCAAGAGATCATTCACTAGAGGCAGACCCCAATATGATCATCTCTCCTTTCTCTCAACAGTTAGCACAGAAAGTTCAGAGGGGCAAACACCACTTGACATGGCAGATGCTTCACCCAGAAAGGTTTCTGCAAGGACTGAACCAAAGAGAAAACTGAAGTCCTCTAGATCAATCAAGCTTGCAACTGTCAAGGGCCAAAAGTCAACAAGAAAGTCATCTGAATCTAGTTATGGCAGTGGTGACCAGAATTGGAGGAGTGCAAGTGATTCTGGTAACAAAACCCAGAGAGTCATTACCAGAAGATTAAGCTTGAAGCCTGTGAGGATCTTAGCAAAGATTCCCACTTTCAAATCAAATAACTCTTCCATGGAGAGGGGCCATCAGATATCTCAATCCCCAGACACAAGCTTGCTTAGAGCCACTTGTTCTTCAGCTCTGAAGGATTCCCATTTTCCTGATAACATTGACATCCCTCAAGAGGAAAGTGACTCTCAAGGAGTATCAGCTGTTGTGAAGGTTTGCCCATATTCTTACTGCTCACTTCATGGTCACCGCCATGGGAATCTGCCTCCATTGAAGCGCTTTGTGTCAATGAGGAGGCGCACGTTGAAGAGCGAAAAGCCAACGAAAATGGATCATCAACATGTTACTAAATCAAATCAGAATGGTAATGCAAAGAAAGCCACTCGGAAAACTCAAACTGTCCACACTAAAGGTGCCAAATCTCATTCTCAGAACAAGAAAAAGCTGACAAGGGACTCATCCATTAGGCCTCATGACAGTCCAGACTCCACAGTTACTGATAGTGTGGAATCAACATCAACAGATGTAGTTCAGCTTTCTGCTCCTGATATTGAGATATTGGAGGGAGAAGTGACCAATACGGACAAAAGTATGGAGCCAGATTATGAAGTACTGGAGGTGAGTTCTGTAAAGAAAGAGTCTACACATGCTAGCACTACTGATATGGCAGGTGGGGAAAAAGATAAAAAGTATGGTAACATGTGGAAGTTGGTTTACAAGCATGCTGTATTAAGTGACACAGGGAAATGTGAAAAGAAGCAGTCCTTTGATGAGAAGGACAAGGAAGGCAGAGAGCAAGATTCCCTTGCAACTAATGAAGTGAACAACTCTTATTGTCGTGATAATTGCGACACAGATCAGGATATCGATGATGAAAATAAGAATGTAGTAGAGCTGGTGCAGAAAGCATTTGATGAAATTCTTCTCCCAGAGCCTGAAGACCTCTTTTCTGATGATAATTTCAAATCTGAAGGCGCTGATTCAGATGAGGTACTCTTAGCAAAGAGTGAAGGCAAGAGTGTATCTCCAGTAGCACAGAGGATAGGGACCAAATCTGACCAAAGAGCACCAAAAAGCTGGAGCAATCTGAAAAAGTTAATCCTCTGGAAAAGGTTTGTAAAGGCATTAGAGAAGGTGAGAAATATCCAGCCCCAAAGACCAATACGTTTTCCTTCTAATGCTAACTTCGAAATAGAAAAAGTTTTTCTTAAGCACCAAACAGCCGAAGACAAAAAGAATGATGAGGAATGGATGCTTGACTATGCACTTCAAAAGGTTATTTCTAAGCTTGCACCTGCTCAAAGACGAAGAGTGACACTTCTAGTAGAAGCTTTCGAAACAATTCAGCCATTTCAAGATGTTGAAAATAGTCCACGATTATCTGCAACATCGGAGCCTCGAGCAAATTCAATTCAATCCCTTGACAATTCCTCAAATCATAGCAAGGAAGAAGCATCACTTTCTCATAATAATACCATGGAACTGGCAGATAGTGGTGGTGATGATCCAATGATAGAACTGCACAACCCTACTATGCTCAAAGAAAGATGTCTCGACCATCCTGAGACCGAGACAGTCAATTTTATGCCTGCATTTGGAGATATTGCAGAAGACATAAATGGAAAGCAATGTTTAACTAGCAGTTATGATAATGAGAATAAGTTATCAAGTGACAATGATAATACTTTTGTTGGAGAGATCAAAGATACCAGATCAAATTCCTTAAATATGCCAGCTGATTTTATAAGAAGCAGTCACGTGGAGGCTACACCCAATGCAACAGTCAATGATGTTTCAGAAGACTTGCTGTTCAGTTTGAATACAGAAAATCATCATATCAAATATGAGTCACCGGGAAGAGATGTTGAAACCAAGAATCTGATTGCTGACAATGGGGAAAAGCTTTCTATTTCTAAAAGTTTAATCCTAGAAGGTCTAGTTAGATCACTCAGATCTAATTTGATTGGTTCAGGAGCACCTGCAAACCTATCAGATGAATCAACAGCTGACGAAAACAAAGGAAATGAAAAAGTTAAGTTTGGAACCGAGACTATTGAAGAGTTCCCTACAAAGGAACAATCGAAAGCTCCTACGAGTGCTGTTGTAGAACCTGAGACCCCAGTGGAGAAACAGAACAACACAGGATTGTGGTACTTGGTATATAAACACATGGTATCAAATATGGCTGAAAACAATTCTAAGTCACTAATTGGTGAGGGAGATGAGAAAGAGTCAGCATTTGATGGAAGCAGAACACAAGAATCTTCTATCTCCAGTGAAAGTACACCTTTTACTGATCAAGACATGCAATTCAAGGACCATGCTGTAGCTGATCCAGAAGTTGCACTCCAACAGATTGAAGCCATCAAGATGGTAGAAGAAGCAATTGATTCAATTCTTCCAGATGATCAGGATGACTTAGCAGACAAGGAGTCACTCACTGGCAACACAATATCAGACAACTCCAAACAATCTGACAGAACTGAAAGAGTGTACAGAGAAGGCCTGAACCAAAAAGAAGAAAAGATGGAATCTGACAATGGAACAATCCAAGAACAAAAAGAAGAATCAGCACCAAAGGAACAAGACAGAACAAGCCAGCCATTGTCGAGAAGCTGGAGCAATCTTAAAAAAGTGATCCTGCTTAGAAGATTCATCAAGTCATTGGAAAAAGTTAGGAAATTCAACCCAAGAGGGCCCAGATATCTACCTCTAGAGCCTGATTCAGAAAATGAAAAAGTTAATTTAAGGCATCAAGACATGGAAGAAAGAAAAGGCACTGAAGAATGGATGCTTGATTATGCACTTCGACAGGTTGTTTCCAAATTAACCCCGGCTAGGAAAAGAAAAGTGGAGCTGCTAGTGGAAGCTTTTGAAACAGTCATTCCAACCATTAAAAATTGA 3363 0.4089 MKVEFEGSQSDCGESQGVSGTDESVSTQQESRRLESKKKLKKVRSIRLVRLPSKRSFTRGRPQYDHLSFLSTVSTESSEGQTPLDMADASPRKVSARTEPKRKLKSSRSIKLATVKGQKSTRKSSESSYGSGDQNWRSASDSGNKTQRVITRRLSLKPVRILAKIPTFKSNNSSMERGHQISQSPDTSLLRATCSSALKDSHFPDNIDIPQEESDSQGVSAVVKVCPYSYCSLHGHRHGNLPPLKRFVSMRRRTLKSEKPTKMDHQHVTKSNQNGNAKKATRKTQTVHTKGAKSHSQNKKKLTRDSSIRPHDSPDSTVTDSVESTSTDVVQLSAPDIEILEGEVTNTDKSMEPDYEVLEVSSVKKESTHASTTDMAGGEKDKKYGNMWKLVYKHAVLSDTGKCEKKQSFDEKDKEGREQDSLATNEVNNSYCRDNCDTDQDIDDENKNVVELVQKAFDEILLPEPEDLFSDDNFKSEGADSDEVLLAKSEGKSVSPVAQRIGTKSDQRAPKSWSNLKKLILWKRFVKALEKVRNIQPQRPIRFPSNANFEIEKVFLKHQTAEDKKNDEEWMLDYALQKVISKLAPAQRRRVTLLVEAFETIQPFQDVENSPRLSATSEPRANSIQSLDNSSNHSKEEASLSHNNTMELADSGGDDPMIELHNPTMLKERCLDHPETETVNFMPAFGDIAEDINGKQCLTSSYDNENKLSSDNDNTFVGEIKDTRSNSLNMPADFIRSSHVEATPNATVNDVSEDLLFSLNTENHHIKYESPGRDVETKNLIADNGEKLSISKSLILEGLVRSLRSNLIGSGAPANLSDESTADENKGNEKVKFGTETIEEFPTKEQSKAPTSAVVEPETPVEKQNNTGLWYLVYKHMVSNMAENNSKSLIGEGDEKESAFDGSRTQESSISSESTPFTDQDMQFKDHAVADPEVALQQIEAIKMVEEAIDSILPDDQDDLADKESLTGNTISDNSKQSDRTERVYREGLNQKEEKMESDNGTIQEQKEESAPKEQDRTSQPLSRSWSNLKKVILLRRFIKSLEKVRKFNPRGPRYLPLEPDSENEKVNLRHQDMEERKGTEEWMLDYALRQVVSKLTPARKRKVELLVEAFETVIPTIKN 1120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03450 1120 MobiDBLite consensus disorder prediction 888 918 - -
Spst1g03450 1120 MobiDBLite consensus disorder prediction 111 148 - -
Spst1g03450 1120 SMART CaM_binding_2 992 1116 IPR012417 GO:0005516
Spst1g03450 1120 SMART CaM_binding_2 490 603 IPR012417 GO:0005516
Spst1g03450 1120 MobiDBLite consensus disorder prediction 403 426 - -
Spst1g03450 1120 MobiDBLite consensus disorder prediction 403 421 - -
Spst1g03450 1120 MobiDBLite consensus disorder prediction 267 282 - -
Spst1g03450 1120 MobiDBLite consensus disorder prediction 903 918 - -
Spst1g03450 1120 MobiDBLite consensus disorder prediction 9 27 - -
Spst1g03450 1120 MobiDBLite consensus disorder prediction 842 861 - -
Spst1g03450 1120 Pfam Plant calmodulin-binding domain 1013 1116 IPR012417 GO:0005516
Spst1g03450 1120 Pfam Plant calmodulin-binding domain 504 602 IPR012417 GO:0005516
Spst1g03450 1120 MobiDBLite consensus disorder prediction 844 861 - -
Spst1g03450 1120 MobiDBLite consensus disorder prediction 72 148 - -
Spst1g03450 1120 MobiDBLite consensus disorder prediction 1 43 - -
Spst1g03450 1120 MobiDBLite consensus disorder prediction 256 339 - -
Spst1g03450 1120 Coils Coil 989 1009 - -
Spst1g03450 1120 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 651 1116 IPR044681 GO:0005516
Spst1g03450 1120 MobiDBLite consensus disorder prediction 976 1015 - -
Spst1g03450 1120 MobiDBLite consensus disorder prediction 312 332 - -
Spst1g03450 1120 MobiDBLite consensus disorder prediction 810 830 - -
Spst1g03450 1120 MobiDBLite consensus disorder prediction 92 106 - -
Spst1g03450 1120 MobiDBLite consensus disorder prediction 283 297 - -
Spst1g03450 1120 MobiDBLite consensus disorder prediction 955 1023 - -
Spst1g03450 1120 MobiDBLite consensus disorder prediction 608 641 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03450 Spst-Chr1 43262748 43266110 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g03450 387 639 Calmodulin-binding Proteins AT5G04020 34.109 1.42e-24 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03450 - - gmx:100804484 1533.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03450 1 43262748 43266110 Spst1g03450 1 43262748 43266110 ECH