Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03439 ATGGCGCCAAAACGAAAACCTTCTTCTCCTATCTCCATCGGTAACTGCGAGGTTACTGTCGAGGCCACTCGTTTCACATGCAACTCTGATTCAAACGGCGTCGTAATCTCGCTTCCCCGAAGCGGAAAGATCCAAGTGTCAGTTGTTGCAAACCATGGGAACGCTTCCGAGGATTTTGGGTCTGTTGATAAAGAGCATGAGTTCGTGCTGGTTAATCCTAAAGATGCTGATTCTATTAGTAAGTCCTACCTTCAGGAAGTATTACAAATGTATAAAACAGAGCTACCTGGAATGAATTATGCTGCTAATACCGGAAAACAATCCAAGTTCCTTGAGAGATGTGTGACTAATGGGAAATATCGAACGCTACTGGTAAAATCCACTTGTGTTGGAAATTCAGGGAAGGTTATAGCTGCAATTACATACCAAATCATCCCGGCAGATACAGAATTTGCAGAGATCCCCCTTGCAGCTGTCAATGCAATCTATCAAAGAAAGGGTTTTGGTCATTTATTGGTTCTAGAGCTACAGAAGAGACTTCAAAATGTTGGAATTCGTTCTATTTTATGCTGGGGAGACAAAGAATCAGAAGGATTTTGGCTGAAACAGGGATTTGTAGAAATAGCACAGGTAGATAACAAAGGAAGGGCCCGCAGATTACCTGTAAAAGCTGATATTCAAAAATCATTATGCTTTCTTGGTGGTTCAACTCTCATGGTTTGTCACGTAAGGAAAGAATTCTTAGCTGATGATGCTAACACTATGAAGTGTCTCCCCTCAGAGTTTCATCAAAATTCTTTTACACCTGCCATTGCTGAAGATGAGCAGCTGGAATTGTCGGGTAAGTTACACGTAGATTTGAAGTTTCTGGATAAATGTTCCCGTAGAACAGAATCAGGGAAAAGTCAACATGAAGCTTTGGTTAAAGATGGATTTTCAACAGAATATGACAAACTCAGTGGTAGTGCATCAATCAGATTTGACTGTCATAATCCTAAGCCATGCTGTAGTAGTATTGCTCCTTTTGCCCAAGTAAACGATGATAGACAGGCCACTGGTGCAGAAAGTTCACAGGATAGAATTGATGCTAATGTGAATTATTGTTCTCATTCTACAAAAGGTGCAAAAAGGGCCTGGGAAGCCTCTTTATCCTCATTGAAGTCAAAAAGAGTTAAGGGGAGCCAGTTGGTTGACTATCAATCAGGTTGTAGCTGCGGTTTTATCTTAGAGAATGATGAGGACAATCCCCGTTTTGAAGATGTCCATCATGATCCTTCGATTACAAAAAGTTCAGAAAAATATATTGAGGATTATTTACATTTAGAAGCTCCCATCAACATAGAACCGCGATCTACTAAACAATGCTTTAGAATTATGTTGATGAATATTGCTGATGATGCTAAGAAAACACAGCTTACAAAGGTGATTGAAGACCTTGGTGGTACTATATCCTATGATGGTAATGAACTGCCTCACATACTGAATGATCCGGATTATCCGCTGAAGTACAAATTTGATTTAAAAAGTGCAGTTTTACGGGCAAAAGCTAGCCCTCATACTTTGTTCAAGGGTTATAATATATGCATTGCAGCTCATGTTCAAACTCCTGCTAAATCATTGTCTGCAATTGTCATGTCCGCAGGTGGTAATGTTATTAGTAGCCTGGAGAAAGTAAACGAAACATCAGCAACAATCTTTGTGACGAGCGAAGAAGACACTGAAGAAGCAATGGTGGCTGCAAAGAAAGGGATCCGGACTTTCAGTAGCGATTGGTTTATGAACTGTGTCATGAGACAAGAACTTGACTTAGAGGCCCCACAGTTTGCCCAGTCCTTATAA 1839 0.4046 MAPKRKPSSPISIGNCEVTVEATRFTCNSDSNGVVISLPRSGKIQVSVVANHGNASEDFGSVDKEHEFVLVNPKDADSISKSYLQEVLQMYKTELPGMNYAANTGKQSKFLERCVTNGKYRTLLVKSTCVGNSGKVIAAITYQIIPADTEFAEIPLAAVNAIYQRKGFGHLLVLELQKRLQNVGIRSILCWGDKESEGFWLKQGFVEIAQVDNKGRARRLPVKADIQKSLCFLGGSTLMVCHVRKEFLADDANTMKCLPSEFHQNSFTPAIAEDEQLELSGKLHVDLKFLDKCSRRTESGKSQHEALVKDGFSTEYDKLSGSASIRFDCHNPKPCCSSIAPFAQVNDDRQATGAESSQDRIDANVNYCSHSTKGAKRAWEASLSSLKSKRVKGSQLVDYQSGCSCGFILENDEDNPRFEDVHHDPSITKSSEKYIEDYLHLEAPINIEPRSTKQCFRIMLMNIADDAKKTQLTKVIEDLGGTISYDGNELPHILNDPDYPLKYKFDLKSAVLRAKASPHTLFKGYNICIAAHVQTPAKSLSAIVMSAGGNVISSLEKVNETSATIFVTSEEDTEEAMVAAKKGIRTFSSDWFMNCVMRQELDLEAPQFAQSL 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03439 612 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 70 213 IPR016181 -
Spst1g03439 612 PANTHER PAX TRANSCRIPTION ACTIVATION DOMAIN INTERACTING PROTEIN 63 235 - -
Spst1g03439 612 CDD NAT_SF 132 191 - -
Spst1g03439 612 ProSiteProfiles BRCT domain profile. 517 601 IPR001357 -
Spst1g03439 612 CDD BRCT_PAXIP1_rpt6_like 521 602 - -
Spst1g03439 612 Gene3D BRCT domain 519 611 IPR036420 -
Spst1g03439 612 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 74 225 IPR000182 GO:0016747
Spst1g03439 612 Pfam Acetyltransferase (GNAT) family 131 205 IPR000182 GO:0016747
Spst1g03439 612 Gene3D - 64 222 - -
Spst1g03439 612 Pfam BRCA1 C Terminus (BRCT) domain 518 596 IPR001357 -
Spst1g03439 612 SUPERFAMILY BRCT domain 521 602 IPR036420 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Spst1g03439 BRCT 0.0002 CL0459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03439 - - gmx:100806087 981.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03439 1 43124970 43130948 Spst1g03439 1 43124970 43130948 ECH