Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03411 ATGTGTGGACTCAGAACCGGGTTTTTGGTTTCTTTTTTATCAACCATGGAGTATGGTACGAGAAATGAGACTCGTGATTTCAATATGGCTTCAAGAAAAGCTGAAGAAGCGGGTCCGTTTGCGTTTTCATTAGCCAAGGCTTCACTTTGTGCTTCTTGCAGACGCTATATGGCAACCCAGTGGCTAGAAAGCCAAGTGGGTCCTCTTGGTATATCAAACCAGCCTACAGAGAGAGAACTCCTTTCTTGCTTGAGAAATGGTCTGATTCTTTGCAATGCCATTAACAAGATTCATCCAGGAGCAGTGCCTAAAGTCGTGGTTGTGGATAATCAAATGCCTTCACAATCGCTTACTTGGGATTCTCAGCCATTGCCCGCTTACCAGTATTTTGTAAATTTACGCAACTTTCTGGTTGCAATGGAAGAATTAAAGCTTCCGGCATTTGAAGCTTCTGATCTTGAAAGGGAAACACTAGAAATAGGATCGGCGGCCAAAGTGGTTGATTGCATTTTGGCACTTAAATCATTTCAAGAGTTGAAGCAGATGAACAATCAGAATGGATACAACAAATACACAAAATCTCCTTTACCTATGAGAATGCATTCAAGAGCTGCATCTTCAGTCCCCTCTGATGCTTGTAGGAACTTGGATTTATCTGCCACAATTGAAAAAATGCCTCCAGCCGAGAGTAATTTTCCGAAACGAGAAGAAATTGTGGAATTACTTGCCAAGCAACTGGTTGACCGTATGTTTGATGCCAAAGAAAATATTGATGGAAACATCATTGCTTCTCTCCGTAAAGAACACCTGGTAGCGGATCCAATAAAGGTATTTAATCAGATAATGACATGTTGTAATGGGGAACAGCTACCTACAAGATTCCATGAGAATTTTGTAAAAGTAGAGGCATTATCACTTCATTCCGCAACTACACAATCAGATGCTTTATCTGCTCCTGACAATTCCAAGCGCTGCCAAGCATGCCGCGGAAAGTGCAAGTGCAACCAGGAGCATCTTTTAAACATGCAGAAAAAAGAACTTCTGGATCTCAAGGCTTTGAAGTTGAAAATTAAGAAAGAGTTTGAAGAGATGAAGTCACAGTTTCAAGGATTTTTTAATGATATTGGAAGTCAAATACAGGAGATGTCATCTAAAGCTGTTGAATATCACAGAGTAGTAGAAGAGAATAGGAAGCTATACAATATGGTACAAGATTTGAAAGGTAATATTCGTGTTTACTGCAGAATCAGACCATCATTCCGGGCTGAATCAAGGAATATTGTTGATTTCTTTGGGGAAGATGGTTCTCTGTTCATTTTAGATCCATCAAAAACACTGAAAGATGGAAGGAAACTTTTCCAGTTTAATAGGGTGTTTGGTCCAACAGCTGGCCAAGATGAGGTTTATAAGGATACTCAACCATTGATTAGATCTGTGATGGATGGATACAATGTTTGTATTTTTGCTTATGGTCAAACTGGATCTGGGAAGACTCACACCATGAGTGGTCCATCAGGTGGAACATCTAAGGATCTGGGAATTAATTATCTGGCTCTTAATGATCTGTTTCAAATCTGCAATGATGATGGATTGAGCCTTCCAGATGCCAGATTGCGCCCAGTGAAGTCTACAACTGATGTTATGACCCTTATGAGACTTGGTGAGGTTAATCGTGCTGTCAGTTTGACTGCAATGAACAACAGGAGTAGTCGTTCCCACAGTGTACTTACTGTGCATGTTCATGGCAAAGATACATCTGGGAGCTCTATTCGCAGTTGCTTGCACTTGGTAGACCTTGCTGGAAGTGAACGAGTAGACAAATCTGAAGTTACAGGGGAAAGACTAAAGGAAGCACAATTTATTAACAAATCTCTTTCCTGTTTGGGAGATGTGATCACAGCCCTGGCTCAAAAGAATTCTCACATCCCTTACAGGAACAGCAAACTCACTCTTCTTTTGCAAGACTCCTTAGGTGGACATGCAAAAACTTTGATGTTTGCTCATGTAAGTCCGGAAGCAGATTCGTTTGGTGAAACAGTGAGTACTTTAAAGTTTGCTCAGAGGGTTTCCACTGTGGAACTGGGGGCCGCTCGTTTGAACAAAGAAAGCAGCGAGGTTATGCAACTTAAAGAACAGGTTGAGAACCTTAAGATTGCATTGGCAAACAAGGAAGCTCAAAGAGTAATGTTCCAAAGAATTAAAGAGCCATACACCCCATCCGAGAAAACTCCAGTACGCTCTCGAAGACTTAGCATTGAGAACTGCAGTGCTGTAAAGACTGATAATAAATCTGTGAATCGTGAGGATAAAAGTGGGGCCAAATCACCACCTTTGTTACCTCGTTCCAGAAGATTAAGTTTGGAAGGTCCAAAAACTATCAAGAAAGATGGTCTACAGTATGAGCCAGTATCTATGCAAAAATATCGCCCAATGCAAGATGCAGAGGCTTTGTCAAAACTAAATGGCCAGTTCAGCAGTGGCAATTCTAGGTCAGAGTTGCACGCCAAAACCCCTCGAAGTCCTACAAGCATTTCCTATCAAAAGAGATTGATAAAAGTAAATGATGGGATGCAAGTTCATCCTATTAAACTTCCTCAAACACCTGAACCACCAGTTCAGGATGGAAATGATGCTCATGGCGCTAAGGTGATGGGTAGCACAAATGGCAAAGGGTCCCAGATAAGAAGATCCTTGAGAACAATTGGGAAACTGATCAATGGCTCGGATAAGAGGAGCCAACAAGCTATGGTTGGGGTCAAGTCACCCATCAGGGGCACTGGCTATAGAAATCATGTAAAATCACCCATCAAGGGCACTGGCCACACAAATCATCCAAAATCACCAATTTCAGTTGTTGAGAAGACAAAGAGGAGGCAATCTCTAACAGGAATTCAAGCACCACTGCCAAACAACTCACGTAGATCTTCACTTGGAGGAAAGCCAGTAGTTGCATCACCTGACTAA 2964 0.4167 MCGLRTGFLVSFLSTMEYGTRNETRDFNMASRKAEEAGPFAFSLAKASLCASCRRYMATQWLESQVGPLGISNQPTERELLSCLRNGLILCNAINKIHPGAVPKVVVVDNQMPSQSLTWDSQPLPAYQYFVNLRNFLVAMEELKLPAFEASDLERETLEIGSAAKVVDCILALKSFQELKQMNNQNGYNKYTKSPLPMRMHSRAASSVPSDACRNLDLSATIEKMPPAESNFPKREEIVELLAKQLVDRMFDAKENIDGNIIASLRKEHLVADPIKVFNQIMTCCNGEQLPTRFHENFVKVEALSLHSATTQSDALSAPDNSKRCQACRGKCKCNQEHLLNMQKKELLDLKALKLKIKKEFEEMKSQFQGFFNDIGSQIQEMSSKAVEYHRVVEENRKLYNMVQDLKGNIRVYCRIRPSFRAESRNIVDFFGEDGSLFILDPSKTLKDGRKLFQFNRVFGPTAGQDEVYKDTQPLIRSVMDGYNVCIFAYGQTGSGKTHTMSGPSGGTSKDLGINYLALNDLFQICNDDGLSLPDARLRPVKSTTDVMTLMRLGEVNRAVSLTAMNNRSSRSHSVLTVHVHGKDTSGSSIRSCLHLVDLAGSERVDKSEVTGERLKEAQFINKSLSCLGDVITALAQKNSHIPYRNSKLTLLLQDSLGGHAKTLMFAHVSPEADSFGETVSTLKFAQRVSTVELGAARLNKESSEVMQLKEQVENLKIALANKEAQRVMFQRIKEPYTPSEKTPVRSRRLSIENCSAVKTDNKSVNREDKSGAKSPPLLPRSRRLSLEGPKTIKKDGLQYEPVSMQKYRPMQDAEALSKLNGQFSSGNSRSELHAKTPRSPTSISYQKRLIKVNDGMQVHPIKLPQTPEPPVQDGNDAHGAKVMGSTNGKGSQIRRSLRTIGKLINGSDKRSQQAMVGVKSPIRGTGYRNHVKSPIKGTGHTNHPKSPISVVEKTKRRQSLTGIQAPLPNNSRRSSLGGKPVVASPD 987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03411 987 Pfam Calponin homology (CH) domain 54 175 IPR001715 GO:0005515
Spst1g03411 987 Gene3D - 47 179 IPR036872 -
Spst1g03411 987 Coils Coil 696 726 - -
Spst1g03411 987 ProSiteProfiles Kinesin motor domain profile. 409 692 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst1g03411 987 MobiDBLite consensus disorder prediction 934 987 - -
Spst1g03411 987 Pfam Kinesin motor domain 530 691 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst1g03411 987 SMART ch_5 54 173 IPR001715 GO:0005515
Spst1g03411 987 MobiDBLite consensus disorder prediction 936 978 - -
Spst1g03411 987 FunFam Kinesin-like protein KIN-14L 26 205 - -
Spst1g03411 987 MobiDBLite consensus disorder prediction 757 802 - -
Spst1g03411 987 MobiDBLite consensus disorder prediction 821 844 - -
Spst1g03411 987 ProSiteProfiles Calponin homology (CH) domain profile. 52 178 IPR001715 GO:0005515
Spst1g03411 987 PRINTS Kinesin heavy chain signature 482 503 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst1g03411 987 PRINTS Kinesin heavy chain signature 642 663 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst1g03411 987 PRINTS Kinesin heavy chain signature 563 580 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst1g03411 987 PRINTS Kinesin heavy chain signature 593 611 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst1g03411 987 Gene3D Kinesin motor domain 529 733 IPR036961 -
Spst1g03411 987 MobiDBLite consensus disorder prediction 866 895 - -
Spst1g03411 987 Gene3D Kinesin motor domain 351 528 IPR036961 -
Spst1g03411 987 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 373 691 IPR027417 -
Spst1g03411 987 Pfam Microtubule binding 395 512 IPR031852 GO:0008017
Spst1g03411 987 SUPERFAMILY Calponin-homology domain, CH-domain 52 191 IPR036872 -
Spst1g03411 987 CDD CH_AtKIN14-like 54 175 - -
Spst1g03411 987 PANTHER KINESIN-LIKE PROTEIN KLP-3 528 838 IPR027640 GO:0003777|GO:0007018
Spst1g03411 987 SMART kinesin_4 407 700 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03411 Spst-Chr1 42797038 42806713 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g03411 339 692 Calmodulin-binding Proteins AT5G65930 39.356 3.40e-64 235