Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03394 ATGGCCGAAATATTTGTATATGACATTGCTGAATCATTGCTAAGGAAGCTTGCATCTTATGTTTATGAAGAAGCTTCTCGAGCCTATAATCTGCATGAGGACGTGCAAGGGATCAAAGACACTTTGTCGATTTTGAAAGGTGTGCTCTTGGATGCTGAGGAGAAGAAGGAGCAGAAACATGGGTTGTGCGAATGGCTCAGGCAGATTCAAAACGTATGCTTAGATGCCGAAGATGTGTTGGATGGATTTGAGTGCCAAAGCTTGAGAAAGCAAGTTGTCATAGCTTCAGGAAGCAACAGGGTGAAGGTAGGACACTTCTTTTCTTCATCAAATTCTCTTGTTTTTCGTCTTCGAATGGCTCGTCAAATAAAATATATTCGGCATAGATTGGATAAGATAGCTACTGATGGGAATAAGTTTTGTCTTGAGAGGATTGATCTTGACCATAGACTTGTGAAAAGGAGAGAAATGACTTATTCCCACGTTGATGCCTCAGGTGTTTTCGGAAGGGAACAGGATAAAGAAGAAATTATCAAGCTTTTGATGCAGCCTCACCCTCACGGTGATGGTTATGGGGATAAAAGTGTGTGTGTTATTCCCATAGTGGGTATTGGAGGGTTGGGGAAGACCACACTTGCAAAGTTGGTGTTCAATGATAGGAGGATGGATGAACTTTTCCAAATAAAGATGTGGGTGTGTATCTCTGATGACTTTGACATTAGGCAGTTAATTGTTAAAATCATCAACTCTGCTTCGGCTTCTTCTTCTTCAACTCCTACTATTTCTATTCCTCACCAAGAAAGCATTAATAACTTAGATATTGAGCATTTACAAAGTCATCTAAGACAGAAGCTTTCTGCTCAGAAGTATTTACTAGTGTTAGATGATATGTGGAATGATGATCGCGCAAAATGGATAGAGTTGAAAGATTTGATAAAGGTTGGTGCAGTGGGAAGCAAAATTGTAGTGACAACACGAAGTAACTCAATCGCTTCAATGATTGGCACTGTTCCCTCATATTCTTTAGAAGGCCTTTCCACGAAGGATTGTTTATCTCTGTTTGTCAAATGGGCATTTAATGAAGGGGAAGAAAGAAGACATCCAAATCTAGTGAAGATGGGAGAAGAAATTGTGAAAAAATGTAAAGGAGTTCCATTAGCAGTGCGTACTTTAGGAAGTTCCCTTTTCTTAAACTTTGATTCAGAAAGGTGGGAATTCATAAGAGACCATGGGATATGGAGTTTAAAACAAAAAAAAGATGATATTTTACCAGCTCTTAAGTTGAGCTATGATCAAATGCCATCATATTTGAAGCAGTGTTTTGCTTACTTTTCCCTTTTTCCTAAAGATTATGGTTTTGCTGGTGCCCAAATTTCTAGTCTTTGGGTAGTACATGGATTATTAGGATCTCCAGCTGGAAGTCAAAATCCAGAAAATGTTGCAAGGCAATATATAGGCGAGTTACATTCAAGATCATTTCTTGAGGATTTTGAGGACTTTGGACACTATTACTATTTCAAAGTACACGATTTGGTACATGATCTTGCATTGTACGTGGCCAAAGAGGACTTTCTAGTGGTCAAGTCCCATACTCACTATATACCTGAGAATGTGAGACACTTCTCAGTTCTTGAATATGATTCACTCAGCTATGCTTTGTTCCCCAAGTCCAGAAGTGTGAGAAGTATACTGTTTCCCATCCATGGAATAGGTGTTGACAGTGAAGCTCTCTTGGAAACATGGCTAACAAGATACAGATACTTAAGAATTTTAGATTTAAGTGATTCCTCTATTGAGTTATCTGATTCAATTGCTAAATTGGAGCATCTGCGAGCTCTCAGTCTTGTGAATAACCGCAAAATAAGAAGACTTCCTCGTTCTTTTTGCAAACTCCAAAACTTGCAAATCTTGTCACTAAGAGGATGCATGGAGCTTGAGACATTGCCTAAGGGATTAGGGATGTTAATCAGCCTTCGAAAATTGTATATAACCACGAAACAATCTACTCTCTCTGAGGATGAATTTGCAAGCTTGACCAATCTTCAAACTCTGAGTTTTGAATATTGTGAGAAATTGAAGTTTTTGTTCAGACGGGTGCAACTGACTTCACTAGAAGTTTTGACTGTCCAATCATGTAGAAGCCTGGAGTCCTTACCTCTTTGTATTGTCCCTAAGCTGGAGGTTCTGTGTGTAATACGCTGCCAGATGCTAAATCTGTCCCAGAGCTATACTAACCCAATGCACAGATTGAGAATGAAATTCCTGCATCTTGAGCATTGTCCAAAGCTACAAACATTGCCTCAGTGGATTGAAGGAGCCGTTGACACTTTGCAGACAATGTTAATCTTAAATTGTCATAATCTTAAGATGCTTCCAGAGTGGTTGACAACAATGGCACGTCTTAAGAAGCTGCATATTGTTAACTGTTCTCAACTGTTGAATCTTCCTAGTGACATGCATAACCTCACTGATCTTGAAGATTTGAGCTTAGATGGTTGTCCTGAGTTGTGTCAAAAATGTGATTCAGAATCTGGTGAGTACTGGCCCTTCATCACTCATGTCAAACGTGTTTCCATTGGAGAAACAAGAGAAGGACAACTCCTTTCTCAAATGCAGTCGCAATTGCGATTGAGGTTGCAAGATGAGTAA 2649 0.3934 MAEIFVYDIAESLLRKLASYVYEEASRAYNLHEDVQGIKDTLSILKGVLLDAEEKKEQKHGLCEWLRQIQNVCLDAEDVLDGFECQSLRKQVVIASGSNRVKVGHFFSSSNSLVFRLRMARQIKYIRHRLDKIATDGNKFCLERIDLDHRLVKRREMTYSHVDASGVFGREQDKEEIIKLLMQPHPHGDGYGDKSVCVIPIVGIGGLGKTTLAKLVFNDRRMDELFQIKMWVCISDDFDIRQLIVKIINSASASSSSTPTISIPHQESINNLDIEHLQSHLRQKLSAQKYLLVLDDMWNDDRAKWIELKDLIKVGAVGSKIVVTTRSNSIASMIGTVPSYSLEGLSTKDCLSLFVKWAFNEGEERRHPNLVKMGEEIVKKCKGVPLAVRTLGSSLFLNFDSERWEFIRDHGIWSLKQKKDDILPALKLSYDQMPSYLKQCFAYFSLFPKDYGFAGAQISSLWVVHGLLGSPAGSQNPENVARQYIGELHSRSFLEDFEDFGHYYYFKVHDLVHDLALYVAKEDFLVVKSHTHYIPENVRHFSVLEYDSLSYALFPKSRSVRSILFPIHGIGVDSEALLETWLTRYRYLRILDLSDSSIELSDSIAKLEHLRALSLVNNRKIRRLPRSFCKLQNLQILSLRGCMELETLPKGLGMLISLRKLYITTKQSTLSEDEFASLTNLQTLSFEYCEKLKFLFRRVQLTSLEVLTVQSCRSLESLPLCIVPKLEVLCVIRCQMLNLSQSYTNPMHRLRMKFLHLEHCPKLQTLPQWIEGAVDTLQTMLILNCHNLKMLPEWLTTMARLKKLHIVNCSQLLNLPSDMHNLTDLEDLSLDGCPELCQKCDSESGEYWPFITHVKRVSIGETREGQLLSQMQSQLRLRLQDE 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03394 882 PRINTS Disease resistance protein signature 699 715 - -
Spst1g03394 882 PRINTS Disease resistance protein signature 381 395 - -
Spst1g03394 882 PRINTS Disease resistance protein signature 284 298 - -
Spst1g03394 882 PRINTS Disease resistance protein signature 198 213 - -
Spst1g03394 882 PANTHER DISEASE RESISTANCE PROTEIN RP 63 802 IPR044974 GO:0006952
Spst1g03394 882 Pfam NB-ARC domain 171 431 IPR002182 GO:0043531
Spst1g03394 882 Gene3D - 149 337 IPR027417 -
Spst1g03394 882 Pfam Rx N-terminal domain 11 100 IPR041118 -
Spst1g03394 882 CDD RX-CC_like 2 134 IPR038005 -
Spst1g03394 882 Gene3D - 344 428 IPR042197 -
Spst1g03394 882 Gene3D Ribonuclease Inhibitor 529 699 IPR032675 -
Spst1g03394 882 Gene3D Ribonuclease Inhibitor 700 843 IPR032675 -
Spst1g03394 882 Gene3D - 429 518 IPR036388 -
Spst1g03394 882 SUPERFAMILY L domain-like 507 863 - -
Spst1g03394 882 Gene3D - 10 124 - -
Spst1g03394 882 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 443 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03394 Spst-Chr1 42566840 42569488 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g03394 199 836 WRKY Transcription Factor Family AT5G45050 22.054 2.60e-12 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03394 - - gmx:100794422 1330.08