Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03393 ATGGCCGAGTATTTTGTCTTTGATATTGCTGAATCACTGATAAAGAAGTTAGCTTCTTATGTTTACGAAGAAGCTTCTCGAGCCTATGGTGTGTATGAGGAGCTTCGAGGGATCAAAGACACCTTATCAATAGTCAAAGGTGTGCTGTTAGATGCTGAGGAGAAGAAGGGACAAAAGCATGGGTTGCGTGAATGGCTGAGGCAGATTCAAAACGTATGCTTAGATGCTGAAGATGTGTTGGATGGATTTGAGTACCAAAACTTGAGAAAGCAAGTTGTCAAAGCTTCAGGAAGCACCAGGATGAAGGTAGGCCATTTCTTTTCTTCATCTAACTCTCTTGTTTTCCGTTTTAGGATGGCTCATAAAATCAAATATATTCGGCATAGATTGGATAAAATAGCTGCTGATGGGAATAAGTTTTGTCTTGAGAGGATTGATTTTGACCATAACCTTGTGCAAAGGAGAGAAATGACTTATTCTCATGTTGATGCTTCACGGGTTATAGGAAGGGAGAAGGATAGGGATGAAATTATCAAGCTTTTGATGCAACCTCACCCTCATGGTGATGGTGTTGGAGATAAAAGTGTGTGTGTTATTCCCGTTGTGGGTATTGGAGGGTTGGGAAAGACCGCACTTGCAAAGTTGGTGTTCAATGATAAGAGGATGGATGAACATTTCCAATTGAAGATGTGGGTGTGTATCTCTAATGACTTTGACATTAGGCAGATAATTGTTAAGATGATCAATTCTGCTTTTGCTTCTGATAATGCTACAGCTTCGGCTAGTGCTCTTGCTCACCAGGACAACGTTAACGGCTTAGATATTGAGCAGTTGCAAAGTCTTCTTAGACACAAGCTTTCTGGTCAGAAGTATTTACTAGTGTTGGATGATACATGGAACGATGATCGTGCAAAATGGATAGAGTTGAAAGATTTAATAAAAGTGGGGGCAGTTGGAAGCAAAATCTTGGTGACAACACGAGGTAACTCAATTGCTTCAATGATGGGCACTGTTCCGTCGTATGTTTTAGAAGCTCTTTCTGCCGAGAATTGTCTATCTCTGTTTGTGAAATGGGCATTTAAGGAAGGTGAAGAGAAAAAATATCCAAATCTAGTGGATATTGGAAGAGAAATTGTGAAAAAATGCGGAGGGGTTCCATTGGCTGTGCGAACTTTAGGAAGTTCACTGTTCTTAAATTTTGATACAGAAAGATGGGAATTTATAAGAGACCAAGAGATATGGAAGTTAAATCAAAAGAAAGATGACATTTTACCTGCTCTTAAGTTGAGCTATGATCAAATGCCATCTTATTTGAGGCACTGTTTTGCATTCTTTTCTCTTTATCCTAAAGATTTTCTCTTTGCTGATGGTTTTTTGGTTAATATTTGGGGATCACTTGGATTACTACAATCTCCCGCTGGAGATCAAAAGATCGAGAATATTGGAAGACAATATATAGAAGAGTTACGATCAAGATCATTTCTCGAGGATTTTAAGAACTTTGGCCCAGTTTATTTTTTCAAACTACATGATTTGGTACATGATCTTGCTCTGTATGTGGCGAAAGAAGAGGTTCTAGTGGTAAACTCTCATACTCACAGTATACCTGAGCATGTAAGGCATTTATCAGTTGTTGAGAATGATTCACTTAGCCATGATTTGTTCCCCAAGTCCAAAAGTGTGAGAACTCTAATCTTTCCCATCCCTGGAGTGGGAATTGACAGTGAAACCCTTTTGGATACGTGGATAAGAAGATACAAATACCTACGGGTTTTATATTTAGGTGATTCCTCTTTTGAGACTTTACCTAATTCAATTGCTAGATTGGAGCACCTGCAAGCTCTCCTACTTACAAATAACACTAAAATAAAAAGAGTTCCTAATTCTATATGCAAGATCCAAAATTTGCAATTTTTGTTTTTCTGGGGATGTGTGGAGCTTGAAACATTGCCTAAAGGATTAGGTATGTTAATCAACCTTCGAAAATTGTTTATCACCACAAAACAATCTATTCTTCCGGAGGATGAATTTGCAAGCTTGACCAATCTTCATACTTTGGGTTTTAAATATTGTGACAATATAAAGATTTTGGTCAGACAAACACAACTCCCATCCCTCAAAGTTTTCATCATTCAATCATGTGGGAGCCTGGAGTCTTTACCTCTGCATTTTCTCTCTCAACTGGAGGCGCTGTTTGTAGAAAGGTGTGAGATGCTAAATTTGTCACTGAATTATGAAAGCACGATCCAAAATTTGAGGATGAAATTTCTGCATCTTGATCATTGTCCAAGGCAACAGTCGTTGCCTCAGTGGATTCAAGGAGCCGCAAACACTTTGAAGACATTGTTAATTTTGAATTGGGATAATCTTACTATGCTTCCAGAATGGCTGACAACAATGAGCCATCTTAAGGTGCTCCAAATTGTTAACTGTCCTCAACTGATTAGTCTCCCAAATGAAATGCATCGCCTCACTGCCCTTGAAGATCTGAGCATGGATGGTTGTCCTGAATTGTGTAGAAAATGTGAACCACAGTGTGGTTTAGCACGTCGGTGGACTGAAACGGGGTACATTTTATCCAAAGCTTATGTGCCCAATATTTCTTTAAGGTGA 2613 0.3892 MAEYFVFDIAESLIKKLASYVYEEASRAYGVYEELRGIKDTLSIVKGVLLDAEEKKGQKHGLREWLRQIQNVCLDAEDVLDGFEYQNLRKQVVKASGSTRMKVGHFFSSSNSLVFRFRMAHKIKYIRHRLDKIAADGNKFCLERIDFDHNLVQRREMTYSHVDASRVIGREKDRDEIIKLLMQPHPHGDGVGDKSVCVIPVVGIGGLGKTALAKLVFNDKRMDEHFQLKMWVCISNDFDIRQIIVKMINSAFASDNATASASALAHQDNVNGLDIEQLQSLLRHKLSGQKYLLVLDDTWNDDRAKWIELKDLIKVGAVGSKILVTTRGNSIASMMGTVPSYVLEALSAENCLSLFVKWAFKEGEEKKYPNLVDIGREIVKKCGGVPLAVRTLGSSLFLNFDTERWEFIRDQEIWKLNQKKDDILPALKLSYDQMPSYLRHCFAFFSLYPKDFLFADGFLVNIWGSLGLLQSPAGDQKIENIGRQYIEELRSRSFLEDFKNFGPVYFFKLHDLVHDLALYVAKEEVLVVNSHTHSIPEHVRHLSVVENDSLSHDLFPKSKSVRTLIFPIPGVGIDSETLLDTWIRRYKYLRVLYLGDSSFETLPNSIARLEHLQALLLTNNTKIKRVPNSICKIQNLQFLFFWGCVELETLPKGLGMLINLRKLFITTKQSILPEDEFASLTNLHTLGFKYCDNIKILVRQTQLPSLKVFIIQSCGSLESLPLHFLSQLEALFVERCEMLNLSLNYESTIQNLRMKFLHLDHCPRQQSLPQWIQGAANTLKTLLILNWDNLTMLPEWLTTMSHLKVLQIVNCPQLISLPNEMHRLTALEDLSMDGCPELCRKCEPQCGLARRWTETGYILSKAYVPNISLR 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03393 870 Gene3D - 345 429 IPR042197 -
Spst1g03393 870 PRINTS Disease resistance protein signature 198 213 - -
Spst1g03393 870 PRINTS Disease resistance protein signature 285 299 - -
Spst1g03393 870 PRINTS Disease resistance protein signature 382 396 - -
Spst1g03393 870 PRINTS Disease resistance protein signature 798 814 - -
Spst1g03393 870 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 444 IPR027417 -
Spst1g03393 870 PANTHER DISEASE RESISTANCE PROTEIN RP 60 817 IPR044974 GO:0006952
Spst1g03393 870 Gene3D - 430 519 IPR036388 -
Spst1g03393 870 Pfam Rx N-terminal domain 11 98 IPR041118 -
Spst1g03393 870 Gene3D - 10 124 - -
Spst1g03393 870 Gene3D Ribonuclease Inhibitor 777 848 IPR032675 -
Spst1g03393 870 Gene3D - 148 340 IPR027417 -
Spst1g03393 870 SUPERFAMILY L domain-like 508 845 - -
Spst1g03393 870 CDD RX-CC_like 12 134 IPR038005 -
Spst1g03393 870 Pfam NB-ARC domain 193 432 IPR002182 GO:0043531
Spst1g03393 870 Gene3D Ribonuclease Inhibitor 569 776 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03393 Spst-Chr1 42560543 42565865 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g03393 589 651 WRKY Transcription Factor Family AT4G12020 36.508 9.91e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03393 - - gmx:100794422 1330.08