Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03389 ATGGCCGAATCATATCTCTTCAGCATCGCGGAGTCACTCATAGCAAAGCTTGCTTCTCATGCTTTTGAAGAAGCTTCTCGAGTGGTGGGTTTAAACGACAGTCTTCGAGACCTTAACAAGACTCTCTCTTTAGTCAAGGCTGTCTTGTTAGATGCTGAGCAAAAGCAGGAGCACAACCATGAGCTGCAGGAATGGCTCACTCAGCTCAAAGCTGTCTTCTCCGATGCTGAAGATGTGTTGGATGAATTTGAGTGCCAAACATTGCGAAAGAAAGTGGTCAAAGCTCATGGCAACGCCAAAGACAAGGTAAGTCACTTCTTCTCAAGCTCTAATCCACTTGTTTTTCGTTACAAGATGGCTCAGCAGATAAAAGATCTCACTCAGAGATTAGACAAGGTCGCAGCTGATAGACACATGTTTAGTCTTCAAAATATTGAGGTTGACACACGTGTCGTGCATACTAGAGAAATGACACACTCTCGTGTGAATGATTCAGATGTTATAGGAAGGGAACACGATAAAGAAACGATCGTACAGCTGTTGATGCAGCAGAATCCTAATGTTAACGATACAAGTCTCTCTGTTATCCCCATTGTGGGGATTGGAGGCTTGGGAAAGACTACACTTGCAAAGTTTGTGTTCAACGACAAAAGGATCGAACAGTGCTTCACATTGAAGATGTGGGTGTGTGTTTCTGATGACTTCGACATTAAGCAACTTATAATCAAAATCATCAATTCTGCCAATGATCAAGCTTCTGCTGATGCTCCTCCTCACCAACAGAACTTGAACATGTTGGATCTGCAACAACTGCAAAATCAGCTGACAAACAAACTTGCCGGTCAAAGTTTCCTACTCGTCTTGGACGACGTATGGAACGAAGACCGTGTTAAATGGATTGAGTTGCGGAATTTAATCCAAGTAAGTGCAGCAGGAAGTAAAATTCTAGTGACCACACGCAGTCATTCAATTGCTTCCATGATGGGTACAGTTTCACCTCACATTTTACAAGGCCTTTCTCAGGAGGATTCGTTGTCTCTCTTCGTCTTATGGGCATTTAAAGAAGGAGAGGAGGACAAACATCCTCGCTTAGTAAGTATTGGCAGAGAAATTGTGAAAAAATGCAGCGGGGTTCCTCTGGCTGTGAGAACATTGGGGAGTTTACTATTCTCCAAATTTGAGGCCAGTGAATGGGAATATGTGAGAGACAACGAAATTTGGAATTTGCCTCAGAAAAAAGATGGCATTTTACATGCTCTTAAATTAAGTTATGATCTCATGCCATCTTATTTGAGACAATGTTTTGCATTGTTTTCCCTTTACCCAAAGGATTATACACTCAATAGTTTTGAGGTAACCTCGCTTTGGGGGGCACTTGGACTCATTGCATTACCAAAAAAGAACAGGACTCTAGAAGATGTGGCCAATGAACATTTGTATGAATTAATGTCGAGATCATTTCTTCAAGATGTTGAGAAGGTTGGCACTTATTATAGTTTCATATTACATGATTTGGTGCATGATCTTGCCCAATTTGTTGCAAAAGGTGAGTGTTTACTTATTCATTCCTACAATCAAAATATTCCTGAGAATGTTCGGCATCTGTCTTTTTCTGAAGGCAACTTGTGCGGCAATTTATTCCCCAAAAAATCAGTATCTTTGAGAACCATAATGTTTCCAAACAGTGCAAAAGGAGCCAACGGTGAAGCTTTACTAAATACTTGCCTGTCAAAGTTCAAATACTTGCGAGTTCTAGATTTATGGTCTTCGACATTTGAGACTTTGCCCCGGACCATTGCTAAGTTGAAACACTTGAGATATCTGGACATTAGCAAAAATAACACTATTAAGAAACTCCCAAATTCAATTTGCAAGCTCCAAAATTTGCTAGTGTTTAGAGTTCTCGAATGCATGGAGCTGGAAGCTTTGCCAAAAGGATTAAGAAAACTGATCAGTGTCCGGCATTTTGAGTTTAGCACAAAGCAATCTGTTTTGCCTGACAATGAGATTGCCAACATGTGCTCGCTTGAAAACCTGTCTGTTGAATCATGCCCTAATGTGGAGTCCCTGTTCGGCGGGGTGGAATTCTCAGCTCTGAAAGTATTGAATGTTGCTGACTGTGAGAGTCTAAAGTGTTTGCCACTGGATGGTAAAATTTTTCCTGAATTAGAAACTTTGGTTGTTGGGTCCTGTGGTAATTTGGACTTGGAACTATCGATGGACCAACATGATGAACAAAGCCCCAAGCTGAAGTTGAAAACTGTTAATTTTTCTGCATTATCACAGCTGGCGACCTTGCCTAAATGGCTTCAAAATGTTGCCAACTCCTTACAGTTCTTGTATATTTCAAATTGCGACAAAATTGAAACACTTCCAGATTGGCTGTCAACTCTGACTGATCTGAAAACACTTTCTATAACAGATTGTCCACAACTGGTATCTCTCCCAGATAATATCGATCACCTCACCGCACTTGAAAGTCTGACGATTGAAGGTTGTCCCGACTTACGTAAAAAATATCAGCCCCATGTTGGAGAGTTTTGGCCAAAAATATCTCACATAAAAAACATTGTCATTGATAATCCAGAAGATCCGGAGAATAATTAG 2607 0.4077 MAESYLFSIAESLIAKLASHAFEEASRVVGLNDSLRDLNKTLSLVKAVLLDAEQKQEHNHELQEWLTQLKAVFSDAEDVLDEFECQTLRKKVVKAHGNAKDKVSHFFSSSNPLVFRYKMAQQIKDLTQRLDKVAADRHMFSLQNIEVDTRVVHTREMTHSRVNDSDVIGREHDKETIVQLLMQQNPNVNDTSLSVIPIVGIGGLGKTTLAKFVFNDKRIEQCFTLKMWVCVSDDFDIKQLIIKIINSANDQASADAPPHQQNLNMLDLQQLQNQLTNKLAGQSFLLVLDDVWNEDRVKWIELRNLIQVSAAGSKILVTTRSHSIASMMGTVSPHILQGLSQEDSLSLFVLWAFKEGEEDKHPRLVSIGREIVKKCSGVPLAVRTLGSLLFSKFEASEWEYVRDNEIWNLPQKKDGILHALKLSYDLMPSYLRQCFALFSLYPKDYTLNSFEVTSLWGALGLIALPKKNRTLEDVANEHLYELMSRSFLQDVEKVGTYYSFILHDLVHDLAQFVAKGECLLIHSYNQNIPENVRHLSFSEGNLCGNLFPKKSVSLRTIMFPNSAKGANGEALLNTCLSKFKYLRVLDLWSSTFETLPRTIAKLKHLRYLDISKNNTIKKLPNSICKLQNLLVFRVLECMELEALPKGLRKLISVRHFEFSTKQSVLPDNEIANMCSLENLSVESCPNVESLFGGVEFSALKVLNVADCESLKCLPLDGKIFPELETLVVGSCGNLDLELSMDQHDEQSPKLKLKTVNFSALSQLATLPKWLQNVANSLQFLYISNCDKIETLPDWLSTLTDLKTLSITDCPQLVSLPDNIDHLTALESLTIEGCPDLRKKYQPHVGEFWPKISHIKNIVIDNPEDPENN 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03389 868 Gene3D - 148 333 IPR027417 -
Spst1g03389 868 Gene3D Ribonuclease Inhibitor 748 844 IPR032675 -
Spst1g03389 868 Gene3D Ribonuclease Inhibitor 522 747 IPR032675 -
Spst1g03389 868 Pfam Rx N-terminal domain 11 99 IPR041118 -
Spst1g03389 868 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 437 IPR027417 -
Spst1g03389 868 Gene3D - 338 422 IPR042197 -
Spst1g03389 868 Gene3D - 10 124 - -
Spst1g03389 868 Pfam NB-ARC domain 171 425 IPR002182 GO:0043531
Spst1g03389 868 PRINTS Disease resistance protein signature 375 389 - -
Spst1g03389 868 PRINTS Disease resistance protein signature 195 210 - -
Spst1g03389 868 PRINTS Disease resistance protein signature 278 292 - -
Spst1g03389 868 PRINTS Disease resistance protein signature 600 616 - -
Spst1g03389 868 SUPERFAMILY L domain-like 502 841 - -
Spst1g03389 868 Coils Coil 35 55 - -
Spst1g03389 868 Coils Coil 66 86 - -
Spst1g03389 868 PANTHER DISEASE RESISTANCE PROTEIN RP 37 830 IPR044974 GO:0006952
Spst1g03389 868 Gene3D - 423 512 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03389 Spst-Chr1 42489271 42491877 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g03389 193 836 WRKY Transcription Factor Family AT5G45050 22.653 1.34e-13 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03389 - - gmx:100777049 1220.68