Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03384 ATGGCTGAATCATTTCTCTTCACCATCGCGGAGTCCCTCCTAACAAAGCTTGCTTCTCATGCATTTGAAGAAGCTTCTCGAGTGGTGGGTTTATACGACAGTCTTCAAGATTTTAACGACACTCTCTCTATAGTCAAGGCTGTGCTGTTAGATGCTGAACAAAAGCAAGAGCACGACCATGAGCTGCGGGCATGGCTCAATCAGCTTAAAGCTGTCTTCTCTGATGCCGAAGATATGCTGGATGAATTTGAGTGTCAAACACTACGAAAGAAAGTGGTCAAAGCTCATGGCAACACCAAAGAGAAGGTAAGTCACTTCTTCTCAACCTCTAATCCTCTAGTTTTTCGTTACAAGATGGCTCACCAAATTAAAGATCTCACCGAAAGACTAGACAAGGTTGCAGAGCGTAGGAGTAAGTTTGGTCTTCAAAAAATTGATGCTGATACACGTGTCGTTCATACTAGAGAAATGACACACTCCCGTCTGAGTGATTTAGATGTGATAGGAAGGGAACACGACAAAGAAAAGATCATAGAGCTTTTGATGCAGCAGAATACTGATGATGATGATACTAGTCTCTCTGTTGTCCCCATTGTGGGAATTGGAGGCTTAGGAAAGACTACACTCGCAAAGTTTGTGTTCAATGACAGCAGGATCCAGGAGTGTTTCCCATTGAAGATGTGGGTTTGTGTTTCTGATGACTTTGACGTTAAGCTGCTGAGTATCAAAATCATCAATTCTGCCAATGATCTAGCTTCTGCTGACGCTCCTCCTCACCTACAGAATTTGAACATGTTGGATCTGGAACTACTGCAAAAGCAACTGACAAACAAACTTTCCGGTAAAAAATTCCTACTCGTCTTGGACGACGTTTGGAACGAAGACCGTGTTAAGTGGATGGAGTTGCGGAATTTAATCCAAGTAAGTGCAGTAGGAAGTAAAATTCTAGTGACCACACGCAGTGCTTCAATTGGTTCCATGATGGGCACAGTTCCCTCTCACATTTTGAAAGGCCTTTCTCAAGAGCACTCTTTGTCTCTCTTTATCAAATGGGCATTTAAAGAAGGAGAAGAGAAAAAACATCCTCGCTTAGTAGACATTGGCAGAGAAATTGTGAAAAAATGCAGAGGGGTTCCTTTGGCTGTGAGAACATTAGGGAGTTTACTATTCTCCAAATTTGAGGCTAGTGAATGGGAATATGTGAGGGATAATGAAATTTGGAATTTGCCTCAGACAAAGGATGGCATTTTACCTGCTCTTAAATTAAGTTATGATCTCATGCCGTCTTATCTAAGGCAATGTTTTCCATTGTTTTCTCTTTACCCAAAGGATTATGAATTCAACAGTTTTGAGGTGACTACTCTTTGGGGGGCACTCGGACTCCTCGAATCACAAAAAAATAATAGAAGGCTGGAAGATGTTGCCAACCAGTATTTGTATGAACTACTATCGAGATCTTTTCTTCAAGATTTTGCGGACAATGGCACTGTTTATGGATTTAGAATACATGATTTGATGCATGATCTTGCTCTAACGGTTGCAAAAGATGAGTGTCTACAAATAAATTCCATCATTGAAAACATTCCAGAGAATGTTCTGCATCTGTCTTTTGTTGAAAGTAATCTGTTTGGAAATTTACGAAGGAGAAAAGCACTACCTGTGAGAACCGTACTGTTTCCAAATGGTGCAGAAGATGCCAACTGTGAAGCTTTACTAAAGACTTGTTTGTCAAAGTTCAAATATTTGAGAGTTTTGGATTTAAATGGTTCGACATTGGAGACTTTGCCCCGTAGCATTGGTAAGTTGAAACACTTGAGATATTTGGATATTAGCAAAAGTCAAATGATTAAGAGACTCCCCAATTCTATATGCAAGCTCCAAAATCTGCAAGTGTTGAAGCTTGACGGGTGCATGAAGCTGGAAGCATTGCCCAAAGGACTAAGAAAGTTAGTAAGTCTCCGGCATTTGGAGTTCAGCACAAAGCAATCTGTTTTGCCTGAAGATGAGATTGCTAGCCTGGGCTTGCTTGCAAATCTGTCTATTGAATCAAGCCGTAAATTGAAGTCTATCTTCGAAGGGGTGAAATTCCCTGCTGTTAAAGTATTGAATGTCAGTGACTGTCAGAGTCTAAAGTCTTTGCCACTGGATGGTACACATTTTCCTGAATTAGAAACTTTGTTTGTTGAAGACTGTGATGATTTGGACTTGGAACTGTGTAAGGGCCACAATGAAGCACAGAGCCCCAGGCTGAAGTTAAAAACTGTTGAATTTTCAACTTTATCACAGCTACTGGCCTTGCCTAAATGGCTTGAAGAAGCTGCCAACTCCTTACAGTGTTTGCATATTTCAAATTGCGACAACATTGAAACACTTCCAGACTGGCTGGCAACTTTCACCAATCTGAAAACACTTTGTATAACAGATTGTCCGAAGTTGGTATCTCTCCCAGATAACATCCATCACCTCACCACACTTGAAAGCTTGAGGATTGAAGGTTGTCCTGACTTGTGCAAAAAATATCAGTCCCATGTTGGAGAGTTGTGGCCCAAAATATCACACATCAAAGACACTTTCATTGATAATCCAGAAGAGCTGGAGAAGAATTAG 2607 0.4085 MAESFLFTIAESLLTKLASHAFEEASRVVGLYDSLQDFNDTLSIVKAVLLDAEQKQEHDHELRAWLNQLKAVFSDAEDMLDEFECQTLRKKVVKAHGNTKEKVSHFFSTSNPLVFRYKMAHQIKDLTERLDKVAERRSKFGLQKIDADTRVVHTREMTHSRLSDLDVIGREHDKEKIIELLMQQNTDDDDTSLSVVPIVGIGGLGKTTLAKFVFNDSRIQECFPLKMWVCVSDDFDVKLLSIKIINSANDLASADAPPHLQNLNMLDLELLQKQLTNKLSGKKFLLVLDDVWNEDRVKWMELRNLIQVSAVGSKILVTTRSASIGSMMGTVPSHILKGLSQEHSLSLFIKWAFKEGEEKKHPRLVDIGREIVKKCRGVPLAVRTLGSLLFSKFEASEWEYVRDNEIWNLPQTKDGILPALKLSYDLMPSYLRQCFPLFSLYPKDYEFNSFEVTTLWGALGLLESQKNNRRLEDVANQYLYELLSRSFLQDFADNGTVYGFRIHDLMHDLALTVAKDECLQINSIIENIPENVLHLSFVESNLFGNLRRRKALPVRTVLFPNGAEDANCEALLKTCLSKFKYLRVLDLNGSTLETLPRSIGKLKHLRYLDISKSQMIKRLPNSICKLQNLQVLKLDGCMKLEALPKGLRKLVSLRHLEFSTKQSVLPEDEIASLGLLANLSIESSRKLKSIFEGVKFPAVKVLNVSDCQSLKSLPLDGTHFPELETLFVEDCDDLDLELCKGHNEAQSPRLKLKTVEFSTLSQLLALPKWLEEAANSLQCLHISNCDNIETLPDWLATFTNLKTLCITDCPKLVSLPDNIHHLTTLESLRIEGCPDLCKKYQSHVGELWPKISHIKDTFIDNPEELEKN 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03384 868 Pfam Leucine rich repeat 581 637 IPR001611 GO:0005515
Spst1g03384 868 Pfam NB-ARC domain 171 425 IPR002182 GO:0043531
Spst1g03384 868 Gene3D - 338 422 IPR042197 -
Spst1g03384 868 Gene3D Ribonuclease Inhibitor 519 739 IPR032675 -
Spst1g03384 868 Pfam Rx N-terminal domain 11 99 IPR041118 -
Spst1g03384 868 Gene3D - 150 332 IPR027417 -
Spst1g03384 868 Gene3D - 423 512 IPR036388 -
Spst1g03384 868 Gene3D - 10 124 - -
Spst1g03384 868 PANTHER DISEASE RESISTANCE PROTEIN RP 57 833 IPR044974 GO:0006952
Spst1g03384 868 SUPERFAMILY L domain-like 501 840 - -
Spst1g03384 868 Coils Coil 66 86 - -
Spst1g03384 868 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 436 IPR027417 -
Spst1g03384 868 Gene3D Ribonuclease Inhibitor 748 848 IPR032675 -
Spst1g03384 868 CDD RX-CC_like 2 135 IPR038005 -
Spst1g03384 868 PRINTS Disease resistance protein signature 278 292 - -
Spst1g03384 868 PRINTS Disease resistance protein signature 195 210 - -
Spst1g03384 868 PRINTS Disease resistance protein signature 624 640 - -
Spst1g03384 868 PRINTS Disease resistance protein signature 375 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03384 Spst-Chr1 42452102 42454708 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g03384 193 822 WRKY Transcription Factor Family AT5G45050 21.958 3.55e-09 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03384 - - gmx:100777049 1199.11