Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03371 ATGGGAGCAGCCTTAGGAACAATTTTCTTCTTTGCTATCCTCCAGCTGGTAACTGTTTTCATCATCTTCAGAAGAAAAAACTCTGCTATGCAAAATGTCGCGATAGCTTTGACAAGCCCAAATCCAAAGGGCTTAATTGTGTTCTCCTTCTCAGAAATCAAGAGCCTGACCGAGGATCTCAAGAATCAAATTGGGCAAAATATGTTCAAGGGTGTGCTACTAAACAATCACCTGGTTGCGGTTAAAGACCTGGATGCATCCATAGAAGAAAGGAAGTTCCGGAGTGCTGTTCTGAAGTTGGGCAACATCCACCACAAGAACCTTATGAAGCTGGAAGGCTATTGTTGTGAGTTTAGTCATAGATTTTTAGTGTATGACTATGCCAAGAACGGTTCTCTAGATAACTACATGGAGGATTCCACTCTTTGCAAGAGGTTAACTTGGAGAAAGAGAGTTGAAATATGCTCAAGTGTGGCAAAGGCCATTTGTTATTTGCACACTGGGTGTAGGGAGTTTCTGAGTCATGGTAACATAAAATGTGAGAATGTCATGTTCGATGAAAACTCAGTGGCCAAGGTGAGTGAATATGGGTTTTCTATAGTAGATGGTAAGGCCGCATATTGTGGCTTTTCAGCTGAGAAAGATGTAAGGGATTTTGGTAAGTTGGTATTAACCTTGTTATTAGGGTGTCAAAATGATGAACAACTTGGTGAGTGGGCATATACTGAATGGATGGAAGGAAGGAAAACTAATTTGGTTGATAAAAGACTTGATGGTGTTATCAATTCTGAGGAACTTGAACGTTTATTAAGAGTCTCATTTTGGTGCCTTCAAATGGATGAACGTAGAAGGCCTTCTATGGAGGAGGTAGTGAGAGTACTAGATGGTACATTGAATGTTGATCCACCACCACCACCCTTTGTCTAG 927 0.4099 MGAALGTIFFFAILQLVTVFIIFRRKNSAMQNVAIALTSPNPKGLIVFSFSEIKSLTEDLKNQIGQNMFKGVLLNNHLVAVKDLDASIEERKFRSAVLKLGNIHHKNLMKLEGYCCEFSHRFLVYDYAKNGSLDNYMEDSTLCKRLTWRKRVEICSSVAKAICYLHTGCREFLSHGNIKCENVMFDENSVAKVSEYGFSIVDGKAAYCGFSAEKDVRDFGKLVLTLLLGCQNDEQLGEWAYTEWMEGRKTNLVDKRLDGVINSEELERLLRVSFWCLQMDERRRPSMEEVVRVLDGTLNVDPPPPPFV 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03371 308 Gene3D Transferase(Phosphotransferase) domain 1 204 301 - -
Spst1g03371 308 Gene3D Transferase(Phosphotransferase) domain 1 128 203 - -
Spst1g03371 308 SUPERFAMILY Protein kinase-like (PK-like) 43 294 IPR011009 -
Spst1g03371 308 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 207 302 - -
Spst1g03371 308 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 128 206 - -
Spst1g03371 308 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 24 127 - -
Spst1g03371 308 Gene3D Phosphorylase Kinase; domain 1 21 127 - -
Spst1g03371 308 ProSiteProfiles Protein kinase domain profile. 50 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g03371 308 Pfam Protein tyrosine and serine/threonine kinase 75 200 IPR001245 GO:0004672|GO:0006468
Spst1g03371 308 PANTHER OS07G0415500 PROTEIN 8 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03371 Spst-Chr1 42311372 42312298 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g03371 2 301 Receptor kinase-like Gene Family AT1G56120 30.882 1.09e-36 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Spst1g03371 PK_Tyr_Ser-Thr 1.8e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03371 - - gmx:100809478 526.554