Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03336 ATGGATGCTGCTGGTACTACCCTTTTGTATTACATCTTCTCCTCCTCCTCCTTAGGGTTCCTTATTTTGATTCTACTTTTCAAGTCCCTTAGCATTTTACGAACCAAAAATGGCAGTGTTCGACCCCCACCAACTCCACCATCACTTCCCATCATTGGCCACCTCCACCTTGTGGGTTCAGTCATACCAAAGTCATTCCAAGCTCTGGCTCGCAAATATGGCCCTCTCATTCAACTCCGTTTAGGTGCTTCAACATGCCTAGTTGTCTCCAACGCCCAAGTCGCCAAAGAAGTGATGAAAACACATGACCTCAATTTCTGTTACCGACCCCAGTTTGGGTCCTCAGAGTACTTCTTATACAAAGGCTCTGCTTTCATCACTGCCCCATATGGCCCTTATTGGCGCTTCATGAAAAAGCTTTGCGTTACTCAACTTCTCTCGAGCACGCAGGTTGGGCGCTTCGTGCACATCCGAGAGCAGGAGATTACGAAGCTCTTGAAATCTCTTGTGGTGTGTTCCTCTGAAGGCAGGGACACGGATTTGAGCTTTGAGCTCACTGCTTTGACCAACAATATCCTGTGTCGGATGGCCATGAGCACTAGTTGTTTTGACAACGTTAATGATGCCGATGCGATTCTTGGCCTGGTGAGGGAGTTTTTGCATCTGGGAGCGAAATTAAGCATGGGTGAGGTGTTGGGACCTTTGGGAAAGTTTGACTTGTTTGGGTATGGGAAGAAGCTTGTTAGAGTAGTTGGCAAATTCGACCAAGTTTTGGAGCACATCTTAGAGGAACATGAAGAGAACAACTCCGAAACAGGGGACATGATGGATATTCTATTGCAAGTCTACAAAGATCCAAATGCTGAAATGAAGTTAACAAGGAACGATATCAAGGCCTTCTTCCTAGATATTTTCCTAGCGGGAACAGACACGTCTTCAACAGCGTCGCAATGGGCCATGGCAGAAATCACGAACAACCCAGGAGTATCGAGGAAGCTGAGAGCAGAGATTGATGCAGTGGTGGGGACTAGCAGGTTGGTCACTGAATCGGACGTTCCAAATCTTCGATATCTCCAAGCTGTTGTTAAGGAAGTGCTAAGACTCCATCCAACGGCACCGTTTGCTCTTAGAGAATCAGCAGAGGACTGCACCATCAACGGCTATGAAATAAAGGGACACACGCGGACACTCATCAATGTCTATGCAATCATGCGGGACCCACAAGCTTGGACCAACCCAGAGGAGTTTATACCGGAAAGGTTCTTAAAAGACACTGATACTGGTGGGATCAACGGTGGAACTGAACGTATGAATATAATGACCGGTGGTGATTTCAGGTACCTTCCATTTGGGTATGGTAGGAGGGGATGTCCTGGATCTTCCCTTGCCTTATCAGTCATACAAGTGACAGTTGCATCACTGATCCAATGTTTTGAATGGAAAATGAAAGAGGGAGAGAAGGTTAGTATGGAAGAAGGGTCATCGTTTTCTGCAGGATTGGCAAAGCCACTTGTTTGTTACCCTGTCACTCGTTTTAATCCTTTTTAA 1548 0.4638 MDAAGTTLLYYIFSSSSLGFLILILLFKSLSILRTKNGSVRPPPTPPSLPIIGHLHLVGSVIPKSFQALARKYGPLIQLRLGASTCLVVSNAQVAKEVMKTHDLNFCYRPQFGSSEYFLYKGSAFITAPYGPYWRFMKKLCVTQLLSSTQVGRFVHIREQEITKLLKSLVVCSSEGRDTDLSFELTALTNNILCRMAMSTSCFDNVNDADAILGLVREFLHLGAKLSMGEVLGPLGKFDLFGYGKKLVRVVGKFDQVLEHILEEHEENNSETGDMMDILLQVYKDPNAEMKLTRNDIKAFFLDIFLAGTDTSSTASQWAMAEITNNPGVSRKLRAEIDAVVGTSRLVTESDVPNLRYLQAVVKEVLRLHPTAPFALRESAEDCTINGYEIKGHTRTLINVYAIMRDPQAWTNPEEFIPERFLKDTDTGGINGGTERMNIMTGGDFRYLPFGYGRRGCPGSSLALSVIQVTVASLIQCFEWKMKEGEKVSMEEGSSFSAGLAKPLVCYPVTRFNPF 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03336 515 FunFam Cytochrome P450 family protein 34 506 - -
Spst1g03336 515 SUPERFAMILY Cytochrome P450 40 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03336 515 Pfam Cytochrome P450 43 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03336 515 CDD CYP93 74 508 - -
Spst1g03336 515 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03336 515 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03336 515 PRINTS E-class P450 group I signature 447 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03336 515 PRINTS E-class P450 group I signature 94 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03336 515 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03336 515 PRINTS E-class P450 group I signature 457 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03336 515 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03336 515 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 450 459 IPR017972 GO:0005506|GO:0016705
Spst1g03336 515 Gene3D Cytochrome P450 32 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03336 515 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03336 515 PRINTS P450 superfamily signature 448 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03336 515 PRINTS P450 superfamily signature 457 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03336 515 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03336 515 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 22 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03336 Spst-Chr1 41981626 41983252 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g03336 1 515 Cytochrome P450 AT2G42250 51.638 0.0 543
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03336 - - gmx:106794180 754.592