Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03335 ATGGCTGATTACCAAGGCTACATCTTACTTTTCATCACATGTTTAGTCTCCACAATCGTGGTTCGAGCCATGCTCAGCAGAAAACAAAACAAGACTAACAGACCACCAAGTCCACAAAGCTTGCCCATCATCGGACATCTCCACCTTCTTGCTCCAATACCTCACCAGGCTCTTCACAAGCTCTCTACTCGCTATGGACCCATAATGCACCTTTTCCTTGGTTCTGTGCCCTGTGTCGTAGCTTCCACACCAGAAGCTGCTAGAGAATTCCTCAAAACTCACGAAAACCATTTCTCCAACCGCCCGCAAAGTTCTGCAGTTGATTTTCTAACATATGGCTCCCAGGACTTCTCCTTCGCGCCATATGGACCTTATTGGAAATTCATGAAGAAAATATGCATGTCTGAACTTCTGGGGGGGGCCACACTCAGTCAGCTTCTTCCTGTGAGGAGACAAGAAACGTTAAGGTTTCTGAGGCTTATGCTCAAGAAAGGGAAGGCAGGTGAGGCCATTGATGTTGGGGGAGAACTTTTGAGACTCTCGAATAACGTTGTGTCGAGGATGATTATGAGCCAAACATGTTCTGAAGATGAGAGTGAAGCGGAAGAGGTGAGGAAGTTGGTGCAAGACACTGTTCTTCTCACAGGGAAGTTTAATGTGTCGGATTTCGTTTGGTTCTTTAAGAACTGGGACGTGCAGGGATTCGGGAAAAGACTCCAGGATATTCGGGACAGGTTTGACAGCATGATGGAGAGGGTGATTAAGGAGCATGAAGAGGAAAGGAAGAAGAGAAAAGAAGTGGGAAGTGACGGAGATGGTCAAATCAAGGATCTACTTCATGTATTATTAGACATACATGAAGATGATAACTCTGACATAAAATTGACGAAAGAGAACATCAAGGCCTTCATCTTGGACGTGTTCATGGCAGGAACAGACACTGCAGCCTTGACAATCGTGTGGGCTCTGGCTGAGTTGATTAACCACCCATATGTGATGGCGAGAGCAAGGCAAGAGATTGATGCTGTGATTGGAAGTGATAGACTAGTTGAAGAATCAGACCTTGTCAACCTTTCTTACCTACAAGCTATAGTCAAAGAAACGCTGAGGATTCACCCCACAGGTCCATTAATTGTTAGAGAATCGTCTGAAAGCTGCACTATTTGGGGCTACGAGATTACACCAAAGACTCAGTTGTTTGTTAATGTGTGGGCTATTGGTAGGGATCCTAATCACTGGGAGAACCCACTTGAGTTTAGACCAGAGAGGTTTCTTAGTGAAGACGGAACTTGTAAGAACCAGTTAGATGTGAGGGGACAATATTTTCACCTGATTCCATTTGGAAGTGGAAGAAGAGGGTGTCCTGGAACCTCACTGGCTTTGCAGGTTGTACAGACCAACCTTGCTGCTATGATTCAGTGCTTTGAATGGAAGGTTGAAGGAGGCAATGAGACTGTTGACATGGAAGAGAAAACTGGGTTAACTCTTTCAAGGGCTCATCCGTTGATTTGTGTTCCTGTGCCTAGGCTTAATCCTTTCCCTCCCCTGTGA 1551 0.4545 MADYQGYILLFITCLVSTIVVRAMLSRKQNKTNRPPSPQSLPIIGHLHLLAPIPHQALHKLSTRYGPIMHLFLGSVPCVVASTPEAAREFLKTHENHFSNRPQSSAVDFLTYGSQDFSFAPYGPYWKFMKKICMSELLGGATLSQLLPVRRQETLRFLRLMLKKGKAGEAIDVGGELLRLSNNVVSRMIMSQTCSEDESEAEEVRKLVQDTVLLTGKFNVSDFVWFFKNWDVQGFGKRLQDIRDRFDSMMERVIKEHEEERKKRKEVGSDGDGQIKDLLHVLLDIHEDDNSDIKLTKENIKAFILDVFMAGTDTAALTIVWALAELINHPYVMARARQEIDAVIGSDRLVEESDLVNLSYLQAIVKETLRIHPTGPLIVRESSESCTIWGYEITPKTQLFVNVWAIGRDPNHWENPLEFRPERFLSEDGTCKNQLDVRGQYFHLIPFGSGRRGCPGTSLALQVVQTNLAAMIQCFEWKVEGGNETVDMEEKTGLTLSRAHPLICVPVPRLNPFPPL 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03335 516 CDD CYP93 66 506 - -
Spst1g03335 516 FunFam Cytochrome P450 family protein 26 504 - -
Spst1g03335 516 PRINTS E-class P450 group I signature 362 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03335 516 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03335 516 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03335 516 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03335 516 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03335 516 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03335 516 PRINTS E-class P450 group I signature 402 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03335 516 PRINTS E-class P450 group I signature 444 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03335 516 PRINTS E-class P450 group I signature 454 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03335 516 Pfam Cytochrome P450 35 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03335 516 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 447 456 IPR017972 GO:0005506|GO:0016705
Spst1g03335 516 SUPERFAMILY Cytochrome P450 30 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03335 516 Gene3D Cytochrome P450 19 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03335 516 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03335 516 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03335 516 PRINTS P450 superfamily signature 454 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03335 516 PRINTS P450 superfamily signature 445 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03335 516 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 13 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03335 Spst-Chr1 41975470 41977259 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g03335 1 509 Cytochrome P450 AT5G06900 49.511 0.0 531
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03335 K24188 - gmx:100779342 890.182