Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03334 ATGATCAATAAAAAAAGAACACTTGATAATACTCAAGGTATGGCATTTCAAGTGTTACTCATTTGTTTGATTTTCACCATCGTGATTGCATCCTTAATGTGGAGAAAACAAAACAAGACCCTCCTTCCACCAAGTCCAATGGCCCTCCCCATCATTGGTCACCTCTACCTTCTCTCCTCAATACCTCACCAAGATTTTCACAAGCTCTCAATCCGCTATGGACCCATCATGCACCTTTTCCTCGGCTCAGTCCCTTGTGTGGTGGCTTCCACCGCACAAGCAGCCAAAGAGTTCCTCAAAACTCACGAAGCCTCCTTCTCCAACCGCCCTGCTGAAGCCGTAGCCGTTGAGGCCTTAACCTACGGCTTCCAAGACTTCTTCTTCGCACCCTACGGACCCTACTGGAAGTTCATGAAGAAACTGTGCATGTCTGAACTTCTCGGTGGCCACATGCTGGACCAGCTCCTTCCCGTGAGGCAGCAAGAGAGCAAGAGATTCATCCAACGCGTGCTTCAAAAAGGGGTGGCTGGTGAGGCCGTGGATTTCGGAGGAGAGTTGATGACACTCTCGAATAACATCGTGTCGAGAATGGCCGTGAGTCAGACGAGTACTGAGAACGAGAATGACATCGAAGAGATGAAGAAGCTGGTGGCGGATTCTGCAGAGCTCGTGGGGAAGTTCAACATATCGGACTTCATTTGGTTCTTGAAGCGTTTCGATTTGCAAGGATTCAACACGAGGCTCAAGAAAACTCGGGACAAGTTCGATGCTGTGTTGGACAGAATCATAAAGCAGCGTGAAGAGGAAAGAAGGATCAACAACCAAACCGGTGGAACACGTCCGTTTAAGGATATGCTTGATGTTTTATTGGACATGTTCGAAGATGAGAGTTCCGAAATCAAACTAAACAAAGACAAAATTAAGGCCTTCATCCTGGACATATTTGTTGCTGGGACTGACACATCATCAGTAACCATAGAATGGGCTATGGCAGAGTTAATCAACCATCCACATGTGTTGGAGAAGGCAAGGCAAGAAATAGATGCAGTGGTTGGAAAGAGTAGAATAGTAGAAGAATCAGACATTAACAACCTTCCTTACCTGCAAGCCATTGTTAAAGAAACATTCAGGCTTCATCCAGCTGGTCCATTACTTCTTAGAGAGTCATCAAGAAGTGTAGTGGTCTGTGGGTATGATATTCCTGCCAAGACTCGATTATTTATCAACAATTGGGCTATTGGTAGGGACCCCAATCTGTGGAAAAACCCTCTTGAGTTCAGACCAGAGAGGTTTATTGGTGAAGAGGAATTGGATGTTAGGGGACAACATTACAATCTACTTCCTTTCGGAAGTGGAAGAAGAAGGTGCCCTGGTATTTCTCTAGGATTACAAGTTGTGCATGTGAATCTGGCTCTGATGATTCAGTGTTTCCAATTGAAGGTTAATGGTGGTAATGGCAAAGTGGACATGGAAGAGAAGTCTGGCCTCACTCTTCCAAGGGCTCACCCTTTATTTTGTGTTCCTGTTCCAAGGCTTAACCCATTCCCTGCTATGTGA 1557 0.4566 MINKKRTLDNTQGMAFQVLLICLIFTIVIASLMWRKQNKTLLPPSPMALPIIGHLYLLSSIPHQDFHKLSIRYGPIMHLFLGSVPCVVASTAQAAKEFLKTHEASFSNRPAEAVAVEALTYGFQDFFFAPYGPYWKFMKKLCMSELLGGHMLDQLLPVRQQESKRFIQRVLQKGVAGEAVDFGGELMTLSNNIVSRMAVSQTSTENENDIEEMKKLVADSAELVGKFNISDFIWFLKRFDLQGFNTRLKKTRDKFDAVLDRIIKQREEERRINNQTGGTRPFKDMLDVLLDMFEDESSEIKLNKDKIKAFILDIFVAGTDTSSVTIEWAMAELINHPHVLEKARQEIDAVVGKSRIVEESDINNLPYLQAIVKETFRLHPAGPLLLRESSRSVVVCGYDIPAKTRLFINNWAIGRDPNLWKNPLEFRPERFIGEEELDVRGQHYNLLPFGSGRRRCPGISLGLQVVHVNLALMIQCFQLKVNGGNGKVDMEEKSGLTLPRAHPLFCVPVPRLNPFPAM 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03334 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506|GO:0016705
Spst1g03334 518 Gene3D Cytochrome P450 33 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03334 518 CDD CYP93 74 508 - -
Spst1g03334 518 PRINTS P450 superfamily signature 317 334 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03334 518 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03334 518 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03334 518 PRINTS E-class P450 group I signature 369 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03334 518 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03334 518 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03334 518 PRINTS E-class P450 group I signature 409 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03334 518 PRINTS E-class P450 group I signature 94 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03334 518 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03334 518 PRINTS E-class P450 group I signature 306 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03334 518 PRINTS E-class P450 group I signature 326 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03334 518 PANTHER CYTOCHROME P450 98A9 16 513 - -
Spst1g03334 518 FunFam Cytochrome P450 family protein 34 506 - -
Spst1g03334 518 Pfam Cytochrome P450 43 505 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03334 518 SUPERFAMILY Cytochrome P450 43 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03334 Spst-Chr1 41971549 41973311 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g03334 18 511 Cytochrome P450 AT5G06900 50.605 0.0 522
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03334 K24188 - gmx:100815706 827.394