Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03333 ATGGCTTTTCAAGTGTTGGTCATCTGTTTCATCTCCACCATCGTGTTTGCATCCATACTAATGCTATGGAGAAAACATAGCAAAACCCTCCTTCCACCAAGTCCCAAAGCTCTTCCCATCATTGGTCACCTCCACCTTCTCTCCCCGATACCTCACCAAGATTTTCACAAGCTCTCAATCCGTTATGGACCCATCATGCACCTTTTTCTTGGCTCAGTCCCTTGCGTGGTGGCTTCCACCGCAGAAGCCGCCAAAGAGTTTCTCAAAACTCACGAACCCTCCTTCTCCAACCGCCCTGCTCAAACTGTTGCCATTGAGGCCTTTTCCTACGGTTTCCAAGACTTCTTGTTCGCACCGTACGGACCCGGTTGGAAGCTCATGAAGAAACTCTGCATGACTGAACTTCTCGGCGGTCGCATGCTCGACCAGTTCCTTCCCGTGAGGCAGCAAGAGACCAAGATATTCATCCAACGAGTGCTCCAAAAGGGGATTGCTGCTGAGGCCGTGGATTTTGGAGCAGAGTTGATGACGCTTTCGATTAACATCGTGTCCAGAATGACCGTGAGTCAGACGAGTTCTGACAACCAGAACAAAGCTGAAGAGATGAGGAAGCTGGTATCGGATGTCGCGGAACTCATAGGGAAGTTCAACATATCAGACTGCATTTGGTTCCTGAAGCGCTTTGATTTGCAAGGATTCAACAAGAGGCTCAAGGAAACAAGGGACAGGTTTGATGCTCTGTTGGACGGAATCATAAAGCAGCGTGAAAAGGAAAGAAGGAACGACAACCAAACCGGTGGAACACGACCATTTAAGGATATGCTTGATGTTTTACTGGACATGTTCGAAGATGAGAATTCCGAAATGAAATTAAACAAAGAGAACGTTAAGGCCTTCATCATGGACTTATTTGTTGCTGGGACTGACACATCATCAGTAACCATAGAATGGGCTATGGCAGAGTTAATCAATCACCCACATGTATTAGAGAAGGCAAGGCAAGAGATTGATGTAGTGGTTGGAAAAAGTAGAATAGTAGAAGAATCAGATATTGTCAACCTTCCTTACCTGCAAGCAATTGTTAGAGAAACATTTAGGCTTCACCCAGCTGGTCCATTGATTGTTAGAGAGTCATCAAGAAGTGCTGTTGTTTGTGGGTATGATATTCCAGCCAAGACTCGATTATTTGTGAACGTTTGGGCTATTGGTAGGGATCCCAATCATTGGAAGAACCCCTTTGAGTTCAGGCCAGAGAGGTTTACTGAAAATGGACAGAGTCAATTGGATGTTAGAGGACAACATTTTCATCTACTTCCGTTCGGGAGTGGAAGAAGAGGATGCCCAGGTACTTCATTGGCGTTGCAGGTCGTGCATGTGAATCTGGCTGTGATGATTCAGTGTTTCCAATGGAAGGTTGATAGTGGTAATGGGAAAGTGGACATGGAAGAAAAGTCTGGCATCACTCTTCCCAGGGCTCATCCTTTAATTTGTGCCGTTGTTCCGAGGTTTAACCCATTCCCGAATATGTGA 1530 0.4595 MAFQVLVICFISTIVFASILMLWRKHSKTLLPPSPKALPIIGHLHLLSPIPHQDFHKLSIRYGPIMHLFLGSVPCVVASTAEAAKEFLKTHEPSFSNRPAQTVAIEAFSYGFQDFLFAPYGPGWKLMKKLCMTELLGGRMLDQFLPVRQQETKIFIQRVLQKGIAAEAVDFGAELMTLSINIVSRMTVSQTSSDNQNKAEEMRKLVSDVAELIGKFNISDCIWFLKRFDLQGFNKRLKETRDRFDALLDGIIKQREKERRNDNQTGGTRPFKDMLDVLLDMFEDENSEMKLNKENVKAFIMDLFVAGTDTSSVTIEWAMAELINHPHVLEKARQEIDVVVGKSRIVEESDIVNLPYLQAIVRETFRLHPAGPLIVRESSRSAVVCGYDIPAKTRLFVNVWAIGRDPNHWKNPFEFRPERFTENGQSQLDVRGQHFHLLPFGSGRRGCPGTSLALQVVHVNLAVMIQCFQWKVDSGNGKVDMEEKSGITLPRAHPLICAVVPRFNPFPNM 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03333 509 FunFam Cytochrome P450 family protein 23 497 - -
Spst1g03333 509 Gene3D Cytochrome P450 24 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03333 509 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03333 509 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03333 509 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03333 509 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03333 509 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03333 509 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03333 509 PRINTS E-class P450 group I signature 83 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03333 509 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03333 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Spst1g03333 509 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03333 509 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03333 509 PRINTS P450 superfamily signature 447 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03333 509 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03333 509 PANTHER CYTOCHROME P450 98A9 9 502 - -
Spst1g03333 509 CDD CYP93 63 497 - -
Spst1g03333 509 Pfam Cytochrome P450 32 496 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03333 509 SUPERFAMILY Cytochrome P450 32 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03333 Spst-Chr1 41943329 41945067 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g03333 5 502 Cytochrome P450 AT5G06900 50.400 0.0 523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03333 K24188 - gmx:100815706 835.099