Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03328 ATGTTTGACGTGGAATATGCAAGATGGGTTGAGGAGCACCACCGCTTAGTGTGTGAGCTAAGAGCTGCAGTGCAAGATCACCTTCCTGAGAACGAGCTTAGACTTTTTGTGGACAATTGTTTGGTGCATTATGACCAAGTAATGAACCTCAAGAGCCTAGTGGCGAAAACTGACGTGTTCCATCTGGTTTCTGGCATGTGGAAGACCCCAGCTGAACGTTGCTTCATGTGGATCGGTGGATTCAGGCCTTCTGAACTCATTAAGGTACATAAAATTATTGTAACCAAGTATGGTTCACAAATGCTACCCACATATCCTAGTCCAGAATCATGTCAAGACATATTATATGTCAAACAGCAAGTGATTATTCTGAGTCAAATTGAGCCTCTGACGGAGCAACAAATATTGGGTATATGTGGATTGCAACAATCAACGCAAGAGGCAGAAGAGGCTCTCACTCAAGGGCTCGATGCTCTCAATCAATCTCTTTCAGACACAATAACTTCAGACTCTCTAAGCTATCCTTCCAATATGGCTAACTATATGGGACAAATGGCTATGGCCATGAACAAGCTCTCAAGTCTCGAAGGTTTCGTGAGACAGGCAGATAATCTTCGGCACCAAACCATTCACCGTCTGCATCAGGTCCTAACAACGCGTCAAGCAGCAAGGTGTTTTCTGGCCATAGCCGAGTACTTTCATCGTCTTCGTGCTCTGAGTTCATTGTGGCTGGCACGCCCTCGCGCAGAATAG 753 0.4542 MFDVEYARWVEEHHRLVCELRAAVQDHLPENELRLFVDNCLVHYDQVMNLKSLVAKTDVFHLVSGMWKTPAERCFMWIGGFRPSELIKVHKIIVTKYGSQMLPTYPSPESCQDILYVKQQVIILSQIEPLTEQQILGICGLQQSTQEAEEALTQGLDALNQSLSDTITSDSLSYPSNMANYMGQMAMAMNKLSSLEGFVRQADNLRHQTIHRLHQVLTTRQAARCFLAIAEYFHRLRALSSLWLARPRAE 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03328 250 ProSiteProfiles DOG1 domain profile. 1 246 IPR025422 GO:0006351|GO:0043565
Spst1g03328 250 PANTHER TRANSCRIPTION FACTOR TGA9 1 249 - -
Spst1g03328 250 Pfam Seed dormancy control 17 89 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03328 Spst-Chr1 41918153 41921899 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g03328 1 250 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 63.922 9.14e-114 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03328 K14431 - gmx:100815176 389.037
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03328 1 41918153 41921899 Spst7g00272 7 2082106 2088687 PCT