Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03327 ATGAGGCCTCCGACTCTCAACATTTTCCCATCTAAGCCTATGCACGTAGAGCCATCATCATCCAAGTCCAAGGTTAACGTAGAGTTAGTTTCTCCGCAAACAAGTGGTTCAAAGAGACCATCAGAGCCGTCGATGGAGTTGGCCAACCCTCGAAACGAAGCTGCTTCTGCTCCACAACCACCCAAAGCTGTCAAGCGAGAGACCAATCGCAAAGGTCCAACGTCAAGTTCTGAACAAGAAGGACCTAAAACACCAGATCCTAAGACACTGAGAAGACTTGCTCAGAATAGAGAGGCAGCTAGGAAAAGCAGGCTTAGGAAAAAGGTAAGCGATTCCCCAGGAAGATTATTTGAACTCAACCCTGATATTTTACACTCTTTTGGTAAGATTTTCAAAGGTCCCCTTATTGGTCATGTGCCATTGGATTTCTCCTCTTTCACTCTCTCAGGCATATGTTCAACAACTAGAGTCAAGTAG 477 0.4549 MRPPTLNIFPSKPMHVEPSSSKSKVNVELVSPQTSGSKRPSEPSMELANPRNEAASAPQPPKAVKRETNRKGPTSSSEQEGPKTPDPKTLRRLAQNREAARKSRLRKKVSDSPGRLFELNPDILHSFGKIFKGPLIGHVPLDFSSFTLSGICSTTRVK 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03327 158 MobiDBLite consensus disorder prediction 84 113 - -
Spst1g03327 158 MobiDBLite consensus disorder prediction 14 42 - -
Spst1g03327 158 Pfam Basic region leucine zipper 85 109 IPR004827 GO:0003700|GO:0006355
Spst1g03327 158 PANTHER TRANSCRIPTION FACTOR TGA9 13 109 - -
Spst1g03327 158 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 91 106 IPR004827 GO:0003700|GO:0006355
Spst1g03327 158 MobiDBLite consensus disorder prediction 1 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03327 Spst-Chr1 41916658 41917806 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g03327 1 137 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 52.667 1.45e-31 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Spst1g03327 bZIP_2 1.7e-05 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03327 K14431 - gmx:100815176 206.838