Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03322 ATGGCAGGAACTGGTTTATACACCTCCTGTCTTTCCTCTTCCAGCAACTTAGGGACATGTTGGTTGGTATTAAAAACTCACAATGCAAGGGCCGTGCCAGGGAAACTACCTGGAACTGGAATGAGAAGATTGGCAATAAAAGCAGAAGTGAAGTATGTGAACGCTGATAAGGGGAAGGAACTTGTGGAAGTGGATGGATACGCTGTTCTTGATGTGAGGGACAAAACTCAATTTGAGCGAGCTCACATCAAATCTTGTAGTCATGTGCCTCTTTTTGTTGAAAACAAGGACAATGATCCCGGTACTATTATAAAAAGGCAGCTGCACAATAATTTTTCTGGGTTGTTCTTTGGGTTACCATTCACTAAACCAAATCCTGATTTTATACAATCTGTTAAGAGCCAGTTTCCACCTGAAAGTAAACTCTTGGTTGTATGCCAGGAAGGACTGAGGTCTGCTGCAGCAGCAAATACGTTAGAAAAAGCTGGTTTCCAAAATATAGCATGCATAACATCTGGCCTTCAAACTGTAAAACCAGGGACATTTGATTCTATTGGGTCCACACAGTTGGAGAATGCAGGCAAAGCTGGTTTGGTGACAATCCAAGGAAAAATCTCAACTGTGTTGGGAACTATTCTTGTTTGTGCATATTTATTCATTACATTCTTCCCTGAGCAAGCAGAGAAGCTATTCCAATTGGCCCCTACAGGATAA 714 0.4174 MAGTGLYTSCLSSSSNLGTCWLVLKTHNARAVPGKLPGTGMRRLAIKAEVKYVNADKGKELVEVDGYAVLDVRDKTQFERAHIKSCSHVPLFVENKDNDPGTIIKRQLHNNFSGLFFGLPFTKPNPDFIQSVKSQFPPESKLLVVCQEGLRSAAAANTLEKAGFQNIACITSGLQTVKPGTFDSIGSTQLENAGKAGLVTIQGKISTVLGTILVCAYLFITFFPEQAEKLFQLAPTG 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03322 237 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 48 175 IPR036873 -
Spst1g03322 237 CDD RHOD 59 178 - -
Spst1g03322 237 ProSiteProfiles Rhodanese domain profile. 63 186 IPR001763 -
Spst1g03322 237 Pfam Rhodanese-like domain 58 175 IPR001763 -
Spst1g03322 237 Gene3D - 41 181 IPR036873 -
Spst1g03322 237 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 9, CHLOROPLASTIC 1 236 IPR044615 -
Spst1g03322 237 SMART rhod_4 53 183 IPR001763 -
Spst1g03322 237 FunFam Rhodanese-like domain-containing protein 9, chloroplastic 40 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03322 Spst-Chr1 41819780 41822900 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g03322 9 231 Sulfurtransferasese or Rhodanese AT2G42220 66.368 1.32e-109 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03322 - - vum:124827221 448.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03322 1 41819780 41822900 Spst1g03322 1 41819780 41822900 ECH