Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03315 ATGTATCAGTATAGTTCCCAGATGTACGGAACTGAATGGGAATCCTACATGGGGATTAGCAACCTAGTCAAGGTTGTTGGATCAGAACAAGTGAGTGTTGTTGAACCAACAAAATCACCCTTCAACATTGTGACCACTCCTCTTCAAATTCAAACCCCACAAGGTTTTTGTGCAAGTGCAACAAAAGCTCTTGTGAGCTTTCAAGCTCAGCAACATCAGATTGAAGTTCCTACTTGGTGCTTTGAGTTTCCAAAGACAACAACAACAGACTCTCACATGCTGAATATTCGCCAAGCTTCTGGGGATAACTTCACCACAATCACCACCAAACAAGATCCCCCCTCCTCTCAATTCACAAGCTCCTTGTGCCCGGTTGCTGAATCTTTCTTGTCGTCCAGCAATGTTGCAGATTGTCCTTCTTCTGAAAAATATTGTAAAATTACTTCCTATTCTGAAAAATATAGTAGCATGCAGCCTGATAGTATGCCATATTACGATCACTTTTCACAAGAAGAAGATAAATTACTGAGAGATGATGCTGCCACAGATGAAAGGCTTCCTGAGATTTCCTTTCAGAAAAACCAGGTTCTTACTTTTGAGGGTGTGCCACAAAAGCAAGCTCCTCATCGACTTTGTGGGGTTGCTTGTGTAACTTCTAGCAACTCTGCTTCTAGGAGAGGCAAAAGAAGAATAAAATGGACCAAAGATCTACACGAGCCATTTATGATGATTGTTAATAGTCTTGGTGGCCCAGAAAAGGCAAAACCTAAGGCTATACTAGATATGATGAAATCAGATTTGCTATCCATTTCTCATGTTAAAAGTCATTTACAGGTCTACCATAAACATGCACAAACCTTTGCAGGCCAAATGCAAATTGAGGAATCACGGCAACTGCAGCTAGAAGTTAGAAGGAATATTTGCCAACAACTAGAGATGCAACGAAATTTGCAAGTGCTGATTCAACAGCAGAGCCAGCAACTAAAAGGAATGTTAGATTACCAAAAGGAAAGAGCCAAACTCGAGAAGTTCCTGGACACAGAACTGGAAGCAATTGTCCCCAAATGA 1068 0.411 MYQYSSQMYGTEWESYMGISNLVKVVGSEQVSVVEPTKSPFNIVTTPLQIQTPQGFCASATKALVSFQAQQHQIEVPTWCFEFPKTTTTDSHMLNIRQASGDNFTTITTKQDPPSSQFTSSLCPVAESFLSSSNVADCPSSEKYCKITSYSEKYSSMQPDSMPYYDHFSQEEDKLLRDDAATDERLPEISFQKNQVLTFEGVPQKQAPHRLCGVACVTSSNSASRRGKRRIKWTKDLHEPFMMIVNSLGGPEKAKPKAILDMMKSDLLSISHVKSHLQVYHKHAQTFAGQMQIEESRQLQLEVRRNICQQLEMQRNLQVLIQQQSQQLKGMLDYQKERAKLEKFLDTELEAIVPK 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03315 355 Gene3D - 227 284 - -
Spst1g03315 355 NCBIfam myb-like DNA-binding domain, SHAQKYF class 228 283 IPR006447 GO:0003677
Spst1g03315 355 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 219 339 IPR044848 GO:0003700
Spst1g03315 355 SUPERFAMILY Homeodomain-like 227 284 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03315 Spst-Chr1 41734590 41737294 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g03315 217 335 G2-like Transcription Factor Family AT4G28610 40.845 3.79e-26 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Spst1g03315 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03315 - - gmx:102662952 498.819