Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03309 ATGGAAAATACAACGAGACAGAGAGAGTACAATGTTAACGAGATGGAAAATGCAATGAAACAGAGAGAGGAACCAACTAGCCATGGCAGAAGGCACCAACATGCAAGACAAAACATACCTCCGCACCCCAAAAAGACTCGGAGAATATCCGAATTGTATTGTGATGATGCCACACGAGGGCAATGTACACAACCTGGTGGGCTAGGCCGCCATAATGATATTCCAGTGACAGGAAGAATTAGAAGACATGATAATGCTGGGGGCACAAGCATACCACCTTCACCCGAAAGAGATGAAATGACTTTGGTAGACTCAAAAAAATTGATTGATGAGGTGGAAAGGATTCTTGCTGAAAGTAGTCCTTCAAATTCTTCGGAGCTTGAGAGGGCCAAGAATTTGTTCATCCTCATGATCAACGTGAAACGCGAATTCGACTCTGACGGCGATAGCAGCAGGACTGACAAACGAAATTCCGAACTCCACCCTGTTAACGACGACGCTGATTACCAAACTCCTAAACGCCGTCGAGGTATTCGTTCTCGGTACCTTGCCGTCAAGAACATGATTGAAGATGAAAGGGAAGAAATTGCGAGGCCTGACTCTGACAAATTCAACTTGATTTTTGATGAAATGGCGAGCTTACATCAGCAAGGCGCCATTCTAGTAGACGATTTCCAACTCTATAGTCATGCACCTCTGCAACGCTACAGGACAACATGGTGTGCCAACATGTATGGGGACTTCCTTGTCAACCCAATGTTTGCTCATTGGGATATCCTAATTACAAAACCAAGAGAACAAGTAGCTGATGCAAAGGCCCTTTTGGAAATAACGAAATCCTTGGTAATGTCTGTGAGAACTACTGCCAATGGGGGAATAACTCCATCAGACTTTGTTACCCACATTCTTAAAAAATTCGGGGGACAAGTTGGACCAAGTAATAGCACAGAAGATTGCAGCAGAAACTCAGTAGCTTGGAATGATATTGGAGTTGCAGCGTCACATGTTTTTAGAGCTGGTTATGGGTGCTGTACAATGATGGGCCCAATGGATGCTAAAATAAAGCAGAGGAAGGTCATTAATCGTCGAAAGCGTGTGACACCCACTGAATTGGCGCGGCCTGAGGAGCTATGTGGAGGTTCAGGGGAAGAGAGAACTGAGACTGATAAACATATGTTAACTATGTTTAACATCTTAAGGGTTAATAAAGTTGTCAAGCTTGAAAATCTGGTTTTGAATCGGAACTCATTTGGACAGACAGTGGAGAACTTATTTGCTTTATCTTTTTTAGTCCGAGATGGTCGAGCTGAAATAAAAGTTAACGAGGCTGGATGGCAGCTAGTTGCGCCAAGGAATGCTCCAGCTTCAAATTCAGTTCGTTCTGGGGATGTTGCTTTCAGCCATTTTGTATTCCGATTTGACTTCAATGATTGGAAGTTGATGGTTCGCACTGTTGAGGTTGGAGAGGAGCTGATGCCTCATAGGAACAAGTCAAGTTAG 1500 0.4387 MENTTRQREYNVNEMENAMKQREEPTSHGRRHQHARQNIPPHPKKTRRISELYCDDATRGQCTQPGGLGRHNDIPVTGRIRRHDNAGGTSIPPSPERDEMTLVDSKKLIDEVERILAESSPSNSSELERAKNLFILMINVKREFDSDGDSSRTDKRNSELHPVNDDADYQTPKRRRGIRSRYLAVKNMIEDEREEIARPDSDKFNLIFDEMASLHQQGAILVDDFQLYSHAPLQRYRTTWCANMYGDFLVNPMFAHWDILITKPREQVADAKALLEITKSLVMSVRTTANGGITPSDFVTHILKKFGGQVGPSNSTEDCSRNSVAWNDIGVAASHVFRAGYGCCTMMGPMDAKIKQRKVINRRKRVTPTELARPEELCGGSGEERTETDKHMLTMFNILRVNKVVKLENLVLNRNSFGQTVENLFALSFLVRDGRAEIKVNEAGWQLVAPRNAPASNSVRSGDVAFSHFVFRFDFNDWKLMVRTVEVGEELMPHRNKSS 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03309 499 MobiDBLite consensus disorder prediction 64 98 - -
Spst1g03309 499 Pfam Nse4 C-terminal 405 492 IPR014854 -
Spst1g03309 499 MobiDBLite consensus disorder prediction 1 31 - -
Spst1g03309 499 MobiDBLite consensus disorder prediction 1 46 - -
Spst1g03309 499 PANTHER UNCHARACTERIZED 151 498 IPR027786 GO:0005634|GO:0006281|GO:0030915
Spst1g03309 499 MobiDBLite consensus disorder prediction 145 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03309 Spst-Chr1 41697048 41704165 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g03309 175 495 Non-SMC Element family AT1G51130 44.099 1.60e-87 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03309 K22825 - gmx:100781485 462.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03309 1 41697048 41704165 Spst1g03309 1 41697048 41704165 ECH