Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03305 ATGGGAATGGAGCGAGTACAGTGTACCTATGACTCTCTGGATGAAACTTTCGAAATTAGGGAAGAGATGTATCAGGGTCAGCAATACAGCCATATTTATTTCACACGTCTTCGTTTGATGCGAACCCTTTTGTATTCCCTCGTTCCTCATTGGAAACCTAATTTTCCTGTTTGCACGGTGCTGGGATTGGAAGAGAGCAAGGAATGTGTCATTGTTGGAACCCTCTACAAACACATGAAGCTCAAACCTTGCATACTTGATGAGTATTCTAAGCAGAAATCAGTGGTTCCCCTTGTCCAGCCACGTAACTTCGTGCACTCAGATGATTACCTAGTTTTGGAAGATGAAAGTGGACGGGTTAAGCTCAATGGAAATATCATTCCGCCATCTGAATATGTAACAGGTATTGTGGTTGCTTTACTTGGAAAAGAAAGTGGGGCAGGTGACTTTTTGGTTCAGGATGTACTAGATGCTGGCTTACCACCACAGATAGAATTTCCCCTTAAATCAGGGGAAGACAAATATGTTGTTCTTGTGTCAGGGTTAAGTGTTGGGAGCAGCAGCTCTAATCCTCTGCAGTTTCAGCTTCTCGTTGATCATATTACAGGGCATTTAGGAGATGAGAAAGAGCAAAGTATTGCATCACAAATTGTTCGACTTATCTTTGCTGGAAATTTAGTGGAGATACCTCAAAGACTTCTTAATGGACAGAATTTGGCTTCAAAGGATCTAGCAAGAATATCTGAGCCAATAAGGGAGCTAGACATTCTGTTGAGTCAGATAGCTGCTGGTTTGCCTTTGGATATCATGCCAGGACCCAGCGACCCTGCCAATTTCTCATTACCACAACAGTCATTGCATAGATGCCTTTTCCCTGGGTCGTCAATGTATAATACTTTTAGATCTTGTACAAATCCTCATTGTTTTGAGCTTGATAATGTCAGGTTTCTTGGGACATCAGGTCAAAATGTAGATGATCTTGACAAGTATTCGGATGCAAAAGATAAACTTGAATTCATGGAAAGGACATTAAGATGGAGGCATTTAGCACCCACTGCACCTAATACTCTTGGATGCTTTCCTTATACTAAGAGGGATCCTTTCTTCATTGAGAGCTGTCCTCATGTTTACTTTGTTGGAAATCAAGATAAATTTGAAACTCGTGTCATAAAGGGATCAGAAGGGCAGTTGGTCAGACTCGTATGTGTTCCTAAATTCAGTGAAACTGGAGTTGCTGTTATGTTAAATATAAGGGACCTCGAATGTCACGCTCTCAGTTTTGGAACTCAATTCAGCTCATAA 1302 0.4124 MGMERVQCTYDSLDETFEIREEMYQGQQYSHIYFTRLRLMRTLLYSLVPHWKPNFPVCTVLGLEESKECVIVGTLYKHMKLKPCILDEYSKQKSVVPLVQPRNFVHSDDYLVLEDESGRVKLNGNIIPPSEYVTGIVVALLGKESGAGDFLVQDVLDAGLPPQIEFPLKSGEDKYVVLVSGLSVGSSSSNPLQFQLLVDHITGHLGDEKEQSIASQIVRLIFAGNLVEIPQRLLNGQNLASKDLARISEPIRELDILLSQIAAGLPLDIMPGPSDPANFSLPQQSLHRCLFPGSSMYNTFRSCTNPHCFELDNVRFLGTSGQNVDDLDKYSDAKDKLEFMERTLRWRHLAPTAPNTLGCFPYTKRDPFFIESCPHVYFVGNQDKFETRVIKGSEGQLVRLVCVPKFSETGVAVMLNIRDLECHALSFGTQFSS 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03305 433 PANTHER DNA POLYMERASE DELTA SUBUNIT 2 4 427 IPR024826 -
Spst1g03305 433 FunFam DNA polymerase delta subunit 2 34 158 - -
Spst1g03305 433 Pfam DNA polymerase delta subunit OB-fold domain 28 155 IPR040663 -
Spst1g03305 433 Gene3D - 167 432 - -
Spst1g03305 433 Pfam DNA polymerase alpha/epsilon subunit B 176 386 IPR007185 GO:0003677|GO:0006260
Spst1g03305 433 FunFam DNA polymerase delta small subunit 161 433 - -
Spst1g03305 433 Gene3D - 34 158 - -
Spst1g03305 433 CDD MPP_PolD2_C 190 427 IPR041863 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g03305 4 432 Core DNA Replication Machinery Family AT2G42120 72.727 0.0 681
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03305 K02328 - gmx:100780072 797.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03305 1 41622365 41640743 Spst1g03305 1 41622365 41640743 ECH