Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03292 ATGAAGTCAAATATGTTCTCTTTTACCCATTCCCTTCCCACCACCATTTTCTTGGTGCTGACAATCTTTCTTCATCCATCAAATGCTCAACTGAATTCATCCTTCTACTCCAGCACATGCCCTAACGTGTCTTCCATTGTGCGCAGTATTATTCAGCAGGCTCTGCAATCTGATACTCGTATTGCTGCGAGCCTGACTCGTCTTCACTTTCATGATTGCTTTGTTAATGGATGTGATGGATCCCTTTTGTTAGACCAAGGTGGGAACATAACACTGAGCGAGAAAAATGCAGGCCCCAACAATAATTCCGCTCGTGGCTTTAATGTAGTCGACAACATAAAGACATCTGTTGAAAATTCATGCCCTGGTGTTGTATCTTGTGCTGATATTCTTGCCCTTGCTGCTGAAGCTTCTGTGTCTTTGGGAGGAGGACCTTCATGGACCGTACTACTAGGCAGAAGGGACAGTTTGATTGCAAACCCATCTGGTGCTAACACTTCCATTCCCACTCCAACTGAAAGCTTGGCCAATGTCACAGCAAAATTTTCTGCCGTTGGCCTAAACATAACTGATCTCGTTGCATTATCTGGTGCACATACTTTTGGTCGTGCACAATGCAGATTTTTTAACCAGAGGCTGTTCAACTTCAGTGGCACGGGTAGCCCAGATCCCACGTTGAACTCAAACTATTTAGCAACCCTGCAGCAAAATTGTCCACAAAATGGAAGCGGGAACACTCTGAACAACCTTGACCCTTCATCCCCAGACACCTTCGACAACAACTACTTCCAAAATCTTCTGAAAAACCAGGGTCTTCTTCAAACAGACCAAGAACTCTTTTCAACTAATGGCTCCGCCACAATAGCCATTGTCAACAACTTCGCCAGCAACCAAACCGCGTTCTTCGAAGCCTTTGCTCAGTCCATGATTAATATGGGTAACATTAGCCCCTTAACTGGAAGCCAGGGAGAAATCAGAATCGATTGTAAGAAAGTCAATGGAAGCTAA 1008 0.4454 MKSNMFSFTHSLPTTIFLVLTIFLHPSNAQLNSSFYSSTCPNVSSIVRSIIQQALQSDTRIAASLTRLHFHDCFVNGCDGSLLLDQGGNITLSEKNAGPNNNSARGFNVVDNIKTSVENSCPGVVSCADILALAAEASVSLGGGPSWTVLLGRRDSLIANPSGANTSIPTPTESLANVTAKFSAVGLNITDLVALSGAHTFGRAQCRFFNQRLFNFSGTGSPDPTLNSNYLATLQQNCPQNGSGNTLNNLDPSSPDTFDNNYFQNLLKNQGLLQTDQELFSTNGSATIAIVNNFASNQTAFFEAFAQSMINMGNISPLTGSQGEIRIDCKKVNGS 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03292 335 FunFam Peroxidase 169 312 - -
Spst1g03292 335 PRINTS Haem peroxidase superfamily signature 191 206 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst1g03292 335 PRINTS Haem peroxidase superfamily signature 125 142 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst1g03292 335 PRINTS Haem peroxidase superfamily signature 251 266 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst1g03292 335 PRINTS Haem peroxidase superfamily signature 143 155 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst1g03292 335 PRINTS Haem peroxidase superfamily signature 62 76 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst1g03292 335 PANTHER PEROXIDASE 72-RELATED 25 332 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst1g03292 335 FunFam Peroxidase 34 181 - -
Spst1g03292 335 Pfam Peroxidase 47 297 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst1g03292 335 ProSitePatterns Peroxidases proximal heme-ligand signature. 191 201 IPR019793 -
Spst1g03292 335 PRINTS Plant peroxidase signature 105 118 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst1g03292 335 PRINTS Plant peroxidase signature 40 59 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst1g03292 335 PRINTS Plant peroxidase signature 249 264 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst1g03292 335 PRINTS Plant peroxidase signature 64 84 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst1g03292 335 PRINTS Plant peroxidase signature 143 158 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst1g03292 335 PRINTS Plant peroxidase signature 307 320 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst1g03292 335 PRINTS Plant peroxidase signature 190 202 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst1g03292 335 PRINTS Plant peroxidase signature 124 134 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst1g03292 335 PRINTS Plant peroxidase signature 265 282 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst1g03292 335 Gene3D - 35 333 - -
Spst1g03292 335 SUPERFAMILY Heme-dependent peroxidases 30 333 IPR010255 GO:0004601|GO:0006979|GO:0020037
Spst1g03292 335 Gene3D Peroxidase, domain 2 169 312 - -
Spst1g03292 335 CDD secretory_peroxidase 30 332 IPR033905 GO:0004601|GO:0042744
Spst1g03292 335 ProSiteProfiles Plant heme peroxidase family profile. 30 333 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03292 Spst-Chr1 41491666 41493327 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g03292 16 335 Peroxidase AT5G06720 77.812 8.04e-180 499
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03292 K00430 - gmx:100810355 609.757