Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03258 ATGGAAGGTCTCCTCGAAGCGTGTCTCACATCGAAAGGGCAATTTGATCATCGTATCAAACTCGTTTTGAGAAGCGGGACCCACCCCGCAGTCAAGAGCAACGTCAGTACGCCACTTGTGCCTACTGCACCATGGGAGATGGATAGAGATAGAAACAACGGAACCGCCTCGGGTGCACGAGAGGGTGCTTACCGTGGGGATCACTGTTGTTGCTGCTGCTTCTTAGGCCTTTTCTGTGGGTTCCCCCTTTCCATATTCACTTTAGAGACACAGGAGAGACAACCAGACATGGCTGGCAGTAACCAAGTCAATCTCAATGAATCTAGGAGTGTTGTTCCGCTAAATACTTGGGTGTTAATCTCGAATTTCAAGCTGTCTTATAAGCTTCTTAGACGTGACGATGGAACGTTCAACCGTGAGTTGGCGGAGTTTCTTGATAGGAAGGTCCCCGCCAATGCAATTCCTGTTGATGGTGTGTTTTCAATCGATCATGTTGATAGAAATGCTGGTTTGTTTTACCGGGTGTATTTGCCAGTCTCTGGGGACGAGGCTCAATGGGGTATCAGAGACCTTGAGAGGCCGCTGAGCGCTACGGAAATTGTTCCTGTGATCATATTTTTTCACGGGGGAAGCTTCTCGCATTCCTCAGCAAACAGTGCTATCTATGATACCTTCTGCCGGCGTCTTGTGAGCATTTGCAAGGCTGCTGTGGTGTCTGTGAACTACCGGCGATCCCCCGAACATCGGTATCCTTGCGCCTATGATGATGGCTGGGCAGCATTGGAGTGGGTGAAGTCAAGAACATGGCTACAAAGTGGGAGGGAGTCCAAGGTTCATGTCTACCTGGCAGGGGACAGTTCTGGTGGGAACATTGTTCATCATGTGGCAGTGAGGGCTGCGGAGGAAGAAATTGAGGTCCTGGGGAATATTCTTCTTCACCCTTTGTTTGGAGGAGAAAAGAGAACGGAATCCGAATTGAGATTGGATGGGAAATACTTTGTGAGGCTGAAGGATCGTGATTGGTATTGGAGGGCTTTTCTGCCTGAAGGAGAAAATAGAGACCATCCTGCTTGCAACCCCTTTGGACCAAGGGGGAGAAGCCTTGCGGGACTCAAGTTCCCCAAAAGTCTTGTTTGCGTGGCCGGTTTGGATCTTCTGCAGGATTGGCAATTGGCATATGCAAAAGGTCTTGAGGATTCTGGACAACAGGTCAAACTTCTGTATCTCAAGGAAGCCACTATTGGCTTCTACTTCTTGCCAAACAATGACCATTTCTATTGCCTCATGAGTGAAATCAACAACTTCTTCTGTGACTGGGGACAACTGCTTCCTGTTCTCTCTGTTCGTGTCTTTCGGAAGGTAGCAACAGCTCTGGCAGTACCAGAACTCGGTTCATTTGGGGATGGATTACTTGTCCTTCTTGAATCGTGGAAATGGGGGAGGCTGAGTGTTGTTTTGTTCTTCAATCCTAAGAGCGTGAAGCCTAACCCATCCACCAAAAGGACAAGAAAAGCTTTCACGCGAAGAATGATTGGCAGGAGTCTGTTTGGAGCTTGGGAAAACAGCAAATACGGGAATTTGGCATTGTTTTGA 1593 0.484 MEGLLEACLTSKGQFDHRIKLVLRSGTHPAVKSNVSTPLVPTAPWEMDRDRNNGTASGAREGAYRGDHCCCCCFLGLFCGFPLSIFTLETQERQPDMAGSNQVNLNESRSVVPLNTWVLISNFKLSYKLLRRDDGTFNRELAEFLDRKVPANAIPVDGVFSIDHVDRNAGLFYRVYLPVSGDEAQWGIRDLERPLSATEIVPVIIFFHGGSFSHSSANSAIYDTFCRRLVSICKAAVVSVNYRRSPEHRYPCAYDDGWAALEWVKSRTWLQSGRESKVHVYLAGDSSGGNIVHHVAVRAAEEEIEVLGNILLHPLFGGEKRTESELRLDGKYFVRLKDRDWYWRAFLPEGENRDHPACNPFGPRGRSLAGLKFPKSLVCVAGLDLLQDWQLAYAKGLEDSGQQVKLLYLKEATIGFYFLPNNDHFYCLMSEINNFFCDWGQLLPVLSVRVFRKVATALAVPELGSFGDGLLVLLESWKWGRLSVVLFFNPKSVKPNPSTKRTRKAFTRRMIGRSLFGAWENSKYGNLALF 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03258 530 PANTHER ARYLACETAMIDE DEACETYLASE 135 411 - -
Spst1g03258 530 Pfam alpha/beta hydrolase fold 204 417 IPR013094 GO:0016787
Spst1g03258 530 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 280 292 IPR033140 -
Spst1g03258 530 Gene3D alpha/beta hydrolase 92 437 IPR029058 -
Spst1g03258 530 SUPERFAMILY alpha/beta-Hydrolases 154 436 IPR029058 -
Spst1g03258 530 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 204 220 IPR002168 GO:0016787
Spst1g03258 530 FunFam Gibberellin receptor GID1 97 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03258 Spst-Chr1 41045249 41050399 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g03258 97 435 Carbohydrate Esterase AT3G63010 74.118 0.0 546
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03258 K14493 - gmx:100788435 654.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03258 1 41045249 41050399 Spst1g03258 1 41045249 41050399 ECH
Spst1g03258 1 41045249 41050399 Spst7g01161 7 35756657 35758471 ECH
Spst1g03258 1 41045249 41050399 Spst7g01161 7 35756657 35758471 PCT