Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03194 ATGACGACTATTCACAGGTTCTGCTGCAACGATCTTCTTCGTTTTGCGTCCGTCAATCTCGACCATCTCACCGAAACATTCAACATGTCCTTCTACATGACCTATCTTGCAAGATGGCCAGACTATTTCCACGTTGCTGAAGGTCCTGGAAATCGTATCATGGGTTACATTATGGGTAAAGTAGAGGGGCAAGGAGAATCTTGGCATGGTCATGTAACTGCGGTAACAGTTGCTCCAGAGTATCGGAGGCAGCAATTAGCCAAGAAACTTATGAATCTGCTGGAAGACATCAGTGATAATATTGACAAGGCTTACTTTGTTGATCTCTTTGTGAGAGCGTCAAATGCACCAGCCATCAAGATGTATGATAAGCTTGGCTATGTGATTTATCGACGGGTGCTACGTTACTATTCTGGGGAAGAAGATGGTTTAGATATGAGGAAGGCTTTGTCTCGTGATGTTGAAAAGAAGTCCATCATCCCTCTTAAACGGCCAGTCACTCCTGATGAATTAGAATCAGTGGATGCTTTGGACGAGAAAAGGATTTCCTCGTTGAAAGACTTTATTGGGCTCATAATCAACGAGGTGGTCTTGCTGGAGCAGTGGTCTAAATTACTTTTGAAGACAAGTTTTGTTTCACATGCAGACCTTTATTTTTCCTTGTGTCTGTATTCCCTATTCACACACACAGATCTTGGTGTACCACCTTATTACAAGGGGCCTAATACTGCTGGACCAGCTAATATTGCTGGACCAGCTGGTGAGAGAACCCAACAATAG 780 0.4346 MTTIHRFCCNDLLRFASVNLDHLTETFNMSFYMTYLARWPDYFHVAEGPGNRIMGYIMGKVEGQGESWHGHVTAVTVAPEYRRQQLAKKLMNLLEDISDNIDKAYFVDLFVRASNAPAIKMYDKLGYVIYRRVLRYYSGEEDGLDMRKALSRDVEKKSIIPLKRPVTPDELESVDALDEKRISSLKDFIGLIINEVVLLEQWSKLLLKTSFVSHADLYFSLCLYSLFTHTDLGVPPYYKGPNTAGPANIAGPAGERTQQ 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03194 259 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 2 151 IPR000182 GO:0016747
Spst1g03194 259 Gene3D - 2 178 - -
Spst1g03194 259 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 2 150 IPR016181 -
Spst1g03194 259 CDD NAT_SF 45 97 - -
Spst1g03194 259 FunFam N-alpha-acetyltransferase 20 2 161 - -
Spst1g03194 259 Pfam Acetyltransferase (GNAT) family 39 127 IPR000182 GO:0016747
Spst1g03194 259 PANTHER N-ALPHA-ACETYLTRANSFERASE 20 1 171 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Spst1g03194 Acetyltransf_1 1.6e-13 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03194 K17972 - gmx:100306394 348.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03194 1 40408448 40420849 Spst1g03194 1 40408448 40420849 ECH