Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03175 ATGGGGGGAGCAGCCACAGTGGTTTGTCTGCAACAGCTAAAATCAATTCTTGGCCTTGAACATTTCACTCACGAGGCCGATCTCGTCTCAGTTATGCGCTCTATTTTCACCCAAACTCATCAGTGGAGGTGGGAAAGCGCTGTGTTGGGTTGTTGCTTTATTTTCTTCCTCCTTGTCACAAGATATTTCAGCAAACGACAACCAAAGTTCTTCTGGGTGTCAGCAATGGCACCGTTGACGTCTGTTATACTGGGAAGTTTACTGGTTTATGTCACACACGCTGAGAAGCATGGAGTTCAAGTGATAGGAAAATTGAAGAAGGGGCTGAATCCACCTTCCGTGACGGATTTGGTGTTTGTGTCACCTTATCTGGGCACTGTCATAAAAACTGGACTTGTCACTGGCATTATAGCACTTGCGGAAGGAATAGCAGTGGGTAGAAGCTTTGCAATGTTTAAAAATTATCATATTGATGGAAACAAAGAGATGATAGCTATTGGAACCATGAACATTTTTGGTTCGTTCACCTCTTGCTATCTCACCACAGGACCTTTTTCACGATCAGCTGTGAACTATAATGCTGGGTGCAAGACTGCTGCATCGAACATTGTGATGGCAATAGCAGTGATGTTAACTTTGTTATTCTTAACACCCTTGTTCCATTTCACTCCCCTGGTGGTGCTATCGGCCATAATTGTGTCAGCAATGCTCGGACTCATTGATTATCAAGCAGCCTTTCATTTGTGGAAAATCGACAAATTTGATTTCTTAGTGTGCTTCAGTGCTTATGTTGGCGTGGTCTTTGGCAGTGTTGAAATTGGCCTAGTCATAGCAGTTGCAGTATCTCTACTTCGATTACTTCTATTTATTGCAAGGCCAAGGACATTTCTCTTAGGAAACATTCCAAATTCTGCAGTATACAGAAATGTGGAACAATATCCAAATGCAAATCATATTCCTGGAATCCTAATTCTTGAAATTGATGCTCCCATTTACTTTGCCAATGCAAGCTATATAAGAGAAAGGATCACAAGGTGGATTGATGAAGAGGAAGATAGAATTAAAGTTTCGGGGCAAACCAGTTTGCAGTATGTTATTATGGATATGACAGCTGTTGGAAACATTGATACAAGCGGAATAAGCATGATTGAAGAGTGCAAGAAAACTGTTGACAGAAGAGGCTTACAACTTGTTTTGGTGAATCCAGGAAGCGAGGTGATGAAGAAGCTGAACAAATCTAAGTTCCTTGATGAACTAGGGCATAAATGGATCTATCTGACAGTTGAAGAGGCTGTTGGTGCATGCAATTTCATGGTCAACACACACAAACCAAACCCCATGAAGGATGATTCAGAAGAATTTGAAGACTTAGCAGAATTTTTTAAAACATAA 1392 0.4116 MGGAATVVCLQQLKSILGLEHFTHEADLVSVMRSIFTQTHQWRWESAVLGCCFIFFLLVTRYFSKRQPKFFWVSAMAPLTSVILGSLLVYVTHAEKHGVQVIGKLKKGLNPPSVTDLVFVSPYLGTVIKTGLVTGIIALAEGIAVGRSFAMFKNYHIDGNKEMIAIGTMNIFGSFTSCYLTTGPFSRSAVNYNAGCKTAASNIVMAIAVMLTLLFLTPLFHFTPLVVLSAIIVSAMLGLIDYQAAFHLWKIDKFDFLVCFSAYVGVVFGSVEIGLVIAVAVSLLRLLLFIARPRTFLLGNIPNSAVYRNVEQYPNANHIPGILILEIDAPIYFANASYIRERITRWIDEEEDRIKVSGQTSLQYVIMDMTAVGNIDTSGISMIEECKKTVDRRGLQLVLVNPGSEVMKKLNKSKFLDELGHKWIYLTVEEAVGACNFMVNTHKPNPMKDDSEEFEDLAEFFKT 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03175 463 FunFam Sulfate transporter 31 292 438 - -
Spst1g03175 463 Pfam STAS domain 313 431 IPR002645 -
Spst1g03175 463 Pfam Sulfate permease family 1 261 IPR011547 GO:0016020
Spst1g03175 463 NCBIfam sulfate permease 1 431 IPR001902 GO:0016020|GO:0055085
Spst1g03175 463 PANTHER SULFATE TRANSPORTER 1 438 IPR001902 GO:0016020|GO:0055085
Spst1g03175 463 Gene3D STAS domain 292 437 IPR036513 -
Spst1g03175 463 ProSiteProfiles STAS domain profile. 312 435 IPR002645 -
Spst1g03175 463 SUPERFAMILY SpoIIaa-like 314 435 IPR036513 -
Spst1g03175 463 CDD STAS_SulP_like_sulfate_transporter 313 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03175 Spst-Chr1 40217337 40224660 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g03175 1 445 Inorganic Solute Cotransporters AT4G02700 67.191 0.0 641
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03175 K17471 - gmx:100791091 853.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03175 1 40217337 40224660 Spst1g03175 1 40217337 40224660 ECH
Spst1g03175 1 40217337 40224660 Spst7g01263 7 41907890 41914439 PCT