Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03174 ATGGGTAACGCAGACTATGCATACCCGAACGTGGAGTGCGGGCACAGAGTGGCCATTCCACCTCCTCAACCATTCTTCAAGTCCCTCAAGTACTCCTTGAAAGAGACCTTTTTCCCAGATGACCCGTTTAGGAGGTTCAAGAACCAAACACCCTCTATGAAGTTCGTCCTTGGACTTCAGTACTTCTTCCCCATCTTTGAGTGGGCACCCAAATACACCCTCCACTTCTTGAAATCAGACCTCATATCTGGCATCACCATTGCCAGTTTGGCCATTCCTCAAGGCATCAGCTACGCCAAGCTCGCCAACCTGCCTCCAATTCTTGGACTTTATTCGAGCTTTATACCGCCGTTGATTTATGCCATGATGGGGAGCTCAAGGGATTTAGCAGTGGGAACTGTGGCGGTTGGATCGCTTCTGATGGCTTCCATGTTGGGTCGAGTGGTGAACTACAACGAGAATCCAAACCTTTTTCTCCACTTGGCTTTCACTGCTACATTCTTTGCTGGAGTTTTGCAGGCATCACTGGGCCTCTTGAGGTACTCTATTATACTATATAGTTCTACTTGTGCTATGTTATAA 582 0.4777 MGNADYAYPNVECGHRVAIPPPQPFFKSLKYSLKETFFPDDPFRRFKNQTPSMKFVLGLQYFFPIFEWAPKYTLHFLKSDLISGITIASLAIPQGISYAKLANLPPILGLYSSFIPPLIYAMMGSSRDLAVGTVAVGSLLMASMLGRVVNYNENPNLFLHLAFTATFFAGVLQASLGLLRYSIILYSSTCAML 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03174 193 PANTHER SULFATE TRANSPORTER 26 184 IPR001902 GO:0016020|GO:0055085
Spst1g03174 193 Pfam Sulfate permease family 77 182 IPR011547 GO:0016020
Spst1g03174 193 ProSitePatterns SLC26A transporters signature. 106 127 IPR018045 GO:0008271|GO:0008272
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03174 Spst-Chr1 40215268 40216328 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g03174 15 185 Inorganic Solute Cotransporters AT4G02700 69.767 4.03e-79 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03174 K17471 - gmx:100791091 336.265