Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03154 ATGAAGGAGCAATCTGATTATAATCCATGGCCCAAGAAGAATGCGCTTCCTCTGTCTGAAGATGAGGAAGAACCTTTCTTCGAAGTCTGTGAGACCGAACCGTCGCCTCCATCCATAGCCTTCATGGTGAGTTCAAATCTATCATTTCTATCTGTTCTGTCATCCCGTATTCAAGGACAATTTGAACCACTGGTGATGAGTCTGGAAAAGAATCCTCGTGTATTTCTAGATGTTTCAATTGATGGGGACCCTGTGGAAAGAATTGTTATTCAGCTTTTTGCCAGTATAGTTCCAAAGACAGCTGAGAATTTTCGGGCACTATGCACAGGTGAGAAGGGCATTGGAGAATCAACTGCAAAACCTTTGCATTACAAGGGAACCAGTTTTCATCGTATAATTAGAGGTTTCATGGCTCAAGGTGGTGATTTTTCAAGGGGTAATGGAACGGGCGGAGAAAGTATATATGGTGGAAAATTTGCAGATGAAAATTTCAAACTAACACATGATGGACCTGGCTTTCTTTCTATGGCGAATAGTGGTCCTAATACAAATGGATCTCAGTTCTTTATTACATTCAAGCGCCAACCTCATCTTGATGGGAAACATGTTGTTTTTGGAAAAGTTGTCAATGGAATTGATGTTCTGAAGAAAATTGAACTGGTGGGAACATCTGATGGGAAACCTACCCAGCCAGTTAAAATTATTGATTGCGGTGAAGTTTCTGAAACAAAAACGCAGCATACTGTTGAGAAGGAGAAAGGAAATAGGAGAAAATCAGGGAAACCCCTTACTTCTGATGATAGTTCCGAGTCTTCTGACAAAAATTCAAGGGTTAAAAGAAAAAAATCTTCCAAAGAAACAAGGAAGAAAAGGAGAAGATACTCTACATCTGATAGTGATAGTTATTCCCCGGATTCTGAGTCAGATTCAGCTTCGGATTCTGAGTCGGATTCATCTGATTCGAGTTCCTCTAGTTATGGGAAGCACAGGAAGAGGAGAAATAAGCGCAAGCATGGGAAGAAGAGGAGAATTGGACGAAAGCAGAGAAAGAGAAGCCGGCACAGTCGAAGTAGAAGATCAAAGCACAAGTCTAGGCGCAGTTCTGAGGATTCAAGTGATAGTACTAGTGGAAGTAGTTCTGGCGATGAGAAAACTGATCGTAAAACACATGCTGACAATAAAGCACAAAGAAAGCTAGAAACAGAAAAGCAATCCTCTAGCCTTCCTCAACAAGGTCAAATTATTCCAGAGCAAACAACGGATACCAAGGGTAGAAGCACTGTGGACAAGCAATCACATGAAGAAGGTGAATTGTCTCCAGAAAATGGTGCATTTGTGAATAATGGGCATGATACTCAAGCTGAATTTAGTAAACCTGCTAAGCAGCATGCTGATTCAGATGATTCAAATCACAATAGAAGTGCGAGTCCTGGAAGAAGTCCTACCAGGGATTCTGGTGAGCTAAACAAAGGACGTGCCTTGTTGCTGGCTAGTCCTGGCCCAAAAGCATCTGAACCTGCTGCCCCTAAACATGGTCAGGGGTTTTCGAAAAGCCCTTCTCCTAATGGCATGCCTAAGCGTATTAAAAAAGGACGTGGCTTTACTGAGCGTTATGCCTTTGCCCGCAGATATCGCACTCCATCTCCAGTGCGGTCTCCTCGCACATATCGTTATGGTGATAGAAATATAAGAAGGAACTTTGATAGAAACACAAGCTACAGAAGTTATTCCGAGCGCTCTCCACCACGACGTTATCGAAGCCCACCTGGGGGCAGAAATCGTCCAAGGTACCATAGCAGGAGAAGTCGTAGTAGGAGCAATTCTCGCAGTCCAGTGCGTGGCCGTTTTAGAGACCGTGGCCGGAGTCGGAGCCCAAGACGCAGTCTTAGTCCTGAAGACAGGCGGCCTCCCATAAGTGACAGATTAAAATCCCGACTTGGTCCAAGAAGTGCTGAACGATTGGCAGACAGGAGGGGAAGGTCAAAGTCCAATTCTAGGAGCAATGACTCATCTCGCTCCAGATCCCCTGATGCTACACCACCTAAACGATATGATAAAAGGACTTCCGTATCTCGTAGCAGGTCTAGGTCCAGCTCTTCATCCGGTCAGAAGGGTTTAGTTTCTTACGGAGATGCTAGTCCTGATTCTGGGGCTAAGTAA 2160 0.4417 MKEQSDYNPWPKKNALPLSEDEEEPFFEVCETEPSPPSIAFMVSSNLSFLSVLSSRIQGQFEPLVMSLEKNPRVFLDVSIDGDPVERIVIQLFASIVPKTAENFRALCTGEKGIGESTAKPLHYKGTSFHRIIRGFMAQGGDFSRGNGTGGESIYGGKFADENFKLTHDGPGFLSMANSGPNTNGSQFFITFKRQPHLDGKHVVFGKVVNGIDVLKKIELVGTSDGKPTQPVKIIDCGEVSETKTQHTVEKEKGNRRKSGKPLTSDDSSESSDKNSRVKRKKSSKETRKKRRRYSTSDSDSYSPDSESDSASDSESDSSDSSSSSYGKHRKRRNKRKHGKKRRIGRKQRKRSRHSRSRRSKHKSRRSSEDSSDSTSGSSSGDEKTDRKTHADNKAQRKLETEKQSSSLPQQGQIIPEQTTDTKGRSTVDKQSHEEGELSPENGAFVNNGHDTQAEFSKPAKQHADSDDSNHNRSASPGRSPTRDSGELNKGRALLLASPGPKASEPAAPKHGQGFSKSPSPNGMPKRIKKGRGFTERYAFARRYRTPSPVRSPRTYRYGDRNIRRNFDRNTSYRSYSERSPPRRYRSPPGGRNRPRYHSRRSRSRSNSRSPVRGRFRDRGRSRSPRRSLSPEDRRPPISDRLKSRLGPRSAERLADRRGRSKSNSRSNDSSRSRSPDATPPKRYDKRTSVSRSRSRSSSSSGQKGLVSYGDASPDSGAK 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03154 719 MobiDBLite consensus disorder prediction 693 707 - -
Spst1g03154 719 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 75 239 IPR002130 GO:0000413|GO:0003755
Spst1g03154 719 MobiDBLite consensus disorder prediction 423 437 - -
Spst1g03154 719 FunFam Peptidyl-prolyl cis-trans isomerase CYP95 66 247 - -
Spst1g03154 719 MobiDBLite consensus disorder prediction 456 472 - -
Spst1g03154 719 MobiDBLite consensus disorder prediction 243 280 - -
Spst1g03154 719 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 85 238 IPR002130 GO:0000413|GO:0003755
Spst1g03154 719 MobiDBLite consensus disorder prediction 380 401 - -
Spst1g03154 719 MobiDBLite consensus disorder prediction 402 422 - -
Spst1g03154 719 MobiDBLite consensus disorder prediction 557 572 - -
Spst1g03154 719 SUPERFAMILY Cyclophilin-like 65 241 IPR029000 -
Spst1g03154 719 Gene3D - 64 248 IPR029000 -
Spst1g03154 719 MobiDBLite consensus disorder prediction 611 667 - -
Spst1g03154 719 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 172 187 IPR002130 GO:0000413|GO:0003755
Spst1g03154 719 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 92 107 IPR002130 GO:0000413|GO:0003755
Spst1g03154 719 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 187 199 IPR002130 GO:0000413|GO:0003755
Spst1g03154 719 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 200 215 IPR002130 GO:0000413|GO:0003755
Spst1g03154 719 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 129 141 IPR002130 GO:0000413|GO:0003755
Spst1g03154 719 MobiDBLite consensus disorder prediction 243 719 - -
Spst1g03154 719 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 124 141 IPR020892 GO:0003755|GO:0006457
Spst1g03154 719 MobiDBLite consensus disorder prediction 328 363 - -
Spst1g03154 719 MobiDBLite consensus disorder prediction 589 610 - -
Spst1g03154 719 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 73 240 - -
Spst1g03154 719 CDD cyclophilin_ABH_like 72 238 - -
Spst1g03154 719 MobiDBLite consensus disorder prediction 676 692 - -
Spst1g03154 719 MobiDBLite consensus disorder prediction 299 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03154 Spst-Chr1 40061941 40068099 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g03154 90 236 U-box Gene Family AT5G67530 48.993 1.45e-33 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03154 K09566 - csav:115717462 481.485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03154 1 40061941 40068099 Spst1g03154 1 40061941 40068099 ECH