Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03135 ATGCAACTTATCTTTCATTGCTCCCTAGCTCTTCCAAATGCCATCACTCTCTCATCCTCTTCTTTCCTTTCCACATCCTCTCTTCTTCACTTCCACCAAATGGCTCTTTCTGCCTCTATGCTGGACCTTCAACCTTCTTCACTGAAGAAGAAAACTGCTGTTTCCAGAAGTTGGATTCTGCTGGACCAACATGGCAAAGCTACTGTTCTGGATGCGGATAAGCATGCTATCATGCGCCTGGTTAAAATTCACGCCAGAGATCTTCGGATTCTCGACCCTCTCTTATCGTATCCCTCCACCATTTTGGGTAGAGAGAAAGTCATTGTTCTCAATTTAGAGCACATAAAAGCTATTATCACTGCAGATGAGGTGTTGCTAAGAGACCCAACGGATGATGACGTTGTGCCAATTATTGAAGAGCTTCGTCGAAGGTTACCCAAAGTAAGTGCTTCTGGGCAAGGCCAAGGAGAAGAAGAGGCGTTTGCTCAAGATGGTGAAGGTGGAGACGAAAATGAATTTCCATTTGAGATACGGACTTTGGAAGTTTTATTTGAGGCAATTTGTAGTTTCCTTGATGCACGAACGAGAGAGTTAGAGACTGCTGCTTACCCTGCTTTGGACGAACTTACCTCGAAGATTAGCAGTCGTAATTTGGATAGAGTGCGAAAATTGAAATGTGCAATGACGAGATTGACAAGTCGTGTTCAAAAGATTAGGGATGAACTGGAAAACCTACTTGATGATGACGACGACATGGCTGATCTTTACTTATCAAGAAAGTCTACTGTTTCAGCCTCTCCAACAAGTAGCTCTGACGCTCCCTATTGGCTTTATGGTTCTCCAAATACAGGTTCAAAAATACACAAATCAAGCAGAGCAAGTGGAACAATAGTTCAAAGGGACAATGATATTGAGGAGCTCGAAATGTTACTTGAGGCCTACTTCATGCAAATTGACGGCACATTAAATAAATTGGCCACATTGCGAGAATATATCGACGACACAGAAGATTACATCAACATACAGCTTGATAATCACCGAAATCAGCTGATTCAGCTAGAGCTCTTCATTAGTGCCGGTACTGTGTGTATGTCCTTATATTCATTGGTGGCTGCAATATTTGGTATGAACATACCATACACATGGAAAGCAACTGGTCACGAACATGTGTTTAAATGGGTGGTGATATTTGCGGGAATGGTTTGTGCATCATTGTTTTTGTCCATAGTATCTTATGCCAGACGCAAAGGTCTTGTTGGGTCTTGA 1266 0.4242 MQLIFHCSLALPNAITLSSSSFLSTSSLLHFHQMALSASMLDLQPSSLKKKTAVSRSWILLDQHGKATVLDADKHAIMRLVKIHARDLRILDPLLSYPSTILGREKVIVLNLEHIKAIITADEVLLRDPTDDDVVPIIEELRRRLPKVSASGQGQGEEEAFAQDGEGGDENEFPFEIRTLEVLFEAICSFLDARTRELETAAYPALDELTSKISSRNLDRVRKLKCAMTRLTSRVQKIRDELENLLDDDDDMADLYLSRKSTVSASPTSSSDAPYWLYGSPNTGSKIHKSSRASGTIVQRDNDIEELEMLLEAYFMQIDGTLNKLATLREYIDDTEDYINIQLDNHRNQLIQLELFISAGTVCMSLYSLVAAIFGMNIPYTWKATGHEHVFKWVVIFAGMVCASLFLSIVSYARRKGLVGS 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03135 421 MobiDBLite consensus disorder prediction 148 168 - -
Spst1g03135 421 Coils Coil 221 248 - -
Spst1g03135 421 CDD Mrs2_Mfm1p-like 58 418 IPR039204 -
Spst1g03135 421 FunFam Magnesium transporter MRS2-1 46 129 - -
Spst1g03135 421 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 43 419 IPR039204 -
Spst1g03135 421 Gene3D - 40 129 - -
Spst1g03135 421 Gene3D Magnesium transport protein CorA, transmembrane region 137 350 - -
Spst1g03135 421 Pfam CorA-like Mg2+ transporter protein 307 406 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03135 Spst-Chr1 39905911 39909826 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g03135 34 394 MRS2 Gene Family AT5G64560 70.461 1.45e-160 455
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03135 K16075 - gmx:100799368 677.167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03135 1 39905911 39909826 Spst1g03135 1 39905911 39909826 ECH