Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03126 ATGTTTCCTCATCTGATACTTTCTTTCTTCTTCTTTTTCGTCCTTCCCGGTCTCTTGTTCTTCTTCCTCGGCCACTCGTCTACAGGTTCGAAGAAGAAAGAGACAGGTTCTGCATCAAACATTTCTCAACCAAAAGTATACCCGTTTATTGGTTCTTATCTAGCCGTCAAATCCCTCGGTAACCGCCGTATTCAGTGGTTGTCCGATGTCCTCAAAAACTCACCCTCTGCCACTTTCACCCTCCACAGCCCCTTGGGCCGCCGGAACATCTTCACTGGCAACCCAGCCACCGTAGAGTACATTCTCAAGACCCGTTTCTCCAATTACGGAAAGGGCATCACCACTACTACCATTCTCTCCGATTTCCTGGGCACAGGAATCTTCAACGCGGATGGCGACAAGTGGAAGTTTCAGAGACAGGTGGCCAGCCAGGAATTCAACACAAAGTCTCTCCGGAAATTCGTGGAGCAAGTGGTGGATGCTGAACTCTCCAACCGTCTCCTCCCCATCCTCGCTTCAGCCGCAGCAAAGCAAGACCAAACCCTCGATTTCCAAGACATTCTCCAACGTTTCGCGTTTGACAACATCTGCAAAATCTCGTTCGGCTTCGACCCCGAGTACCTGACACCGTCCGTTGAACGAAGCAGATTCGCGCGAGCCTTCGAAGAAGCGACAGAGATCAGCAGCAACCGGTTCCGCGAGCCTTTGTGGTTAGTGTGGAAATTGAAGAGAGTACTTAACATAGGTTCGGAAAAGCGATTGCGAATGGCAGTAAGGGAAGTGCGCGAGTTCGCGAAGAACATAGTGAGAGAGAAGAAGAGGGAACTGAAGGAGAAGGAATCGCTTGAATCGGTGGACATGCTTTCGCGGTTCTTGAGTTCGGGACACTCTAATGAAGACTTCGTGACGGACATAGTCATAAGTTTCATATTGGCAGGGAAGGATACCACGTCAGCTGCGCTGACGTGGTTTTTCTGGCTGCTGTCGAAGAACCCGCGCGTGGAGAAGGAGATTGTGAATGAGATAATGGAAAAATCGGAGGTTCCAGTGTACGATGAAGTGAAGAATATGATTTACACTCATGCAGCGCTGTGTGAAAGCATGAGGCTGTACCCTCCGGTTCCGACGGATGTGAAGGAAGCAATGGGCGACGACGTTTTGCCGGATGGGACGGTAGTGAAGAAGGGGATGTTGGTGACGTATCACGTGTACGCCATGGGGAGGTTGGAGAGTATTTGGGGTGAGGATTGGGCGGAGTTTAAGCCAGAGAGGTGGTTAGAGAAGGTTGAATCCGGAAAGTGGAGATTTATGGGAAGGGATTCGTTCACCTATCCAGTGTTTCAGGCGGGTCCAAGGATTTGCTTGGGGAAGGAAATGGCTTTTATGCAGATGAAGAGGATGGTGGCTGGCGTTCTCAGGCGGTTCACGGTGGTTCCCGCGGTTGCTCAAGAGGTCGAGCCTCACTACTTTTCGTTCTTGACTTCTCTTATGGAAGGTGGCTTCCCGGTCAAGATCGTTCAAAGGGTTCCTTCAAATTGA 1539 0.5042 MFPHLILSFFFFFVLPGLLFFFLGHSSTGSKKKETGSASNISQPKVYPFIGSYLAVKSLGNRRIQWLSDVLKNSPSATFTLHSPLGRRNIFTGNPATVEYILKTRFSNYGKGITTTTILSDFLGTGIFNADGDKWKFQRQVASQEFNTKSLRKFVEQVVDAELSNRLLPILASAAAKQDQTLDFQDILQRFAFDNICKISFGFDPEYLTPSVERSRFARAFEEATEISSNRFREPLWLVWKLKRVLNIGSEKRLRMAVREVREFAKNIVREKKRELKEKESLESVDMLSRFLSSGHSNEDFVTDIVISFILAGKDTTSAALTWFFWLLSKNPRVEKEIVNEIMEKSEVPVYDEVKNMIYTHAALCESMRLYPPVPTDVKEAMGDDVLPDGTVVKKGMLVTYHVYAMGRLESIWGEDWAEFKPERWLEKVESGKWRFMGRDSFTYPVFQAGPRICLGKEMAFMQMKRMVAGVLRRFTVVPAVAQEVEPHYFSFLTSLMEGGFPVKIVQRVPSN 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03126 512 SUPERFAMILY Cytochrome P450 43 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03126 512 Gene3D Cytochrome P450 28 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03126 512 PRINTS P450 superfamily signature 312 329 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03126 512 PRINTS P450 superfamily signature 445 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03126 512 PRINTS P450 superfamily signature 454 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03126 512 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03126 512 CDD CYP86A 78 501 - -
Spst1g03126 512 Coils Coil 262 285 - -
Spst1g03126 512 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03126 512 PRINTS E-class P450 group I signature 454 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03126 512 PRINTS E-class P450 group I signature 301 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03126 512 PRINTS E-class P450 group I signature 321 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03126 512 PRINTS E-class P450 group I signature 444 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst1g03126 512 PANTHER CYTOCHROME P450 32 502 - -
Spst1g03126 512 Pfam Cytochrome P450 44 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03126 Spst-Chr1 39847691 39849229 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g03126 6 508 Cytochrome P450 AT5G63450 47.337 1.70e-152 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03126 K20769 K13407 gmx:100818732 813.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03126 1 39847691 39849229 Spst1g03126 1 39847691 39849229 ECH