Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03103 ATGGAGGACTTAAAGGAAAAGGTCAATGAAGGGGAACCAAAGGAAATAAAGTATAGAGGAGTAAGGAGGAGGCCATGGGGAAAGTTTGCTGCAGAGATTAGAGATTCGGCTAGACATGGAGCTCGTGTGTGGCTTGGGACCTTTAACACTGCTGAGGAGGCAGCAAGAGCTTACGATCGTGCTGCCTTTGAAATGAGAGGAACAATGGCCATTCTCAACTTCCCACATGAACACCTTCCTTGCAATGTGGCCACTTTCAGCAACAAGTCCTCATCATCTAAGACTGAACTTGGTAAACAAGTTGTCGTATTTGAGTATCTGGATGACAAATTGTTAGAGGAACTCCTTGATTGTGATGACAAAACCGGCAATGAACACTTCGACAAGTAG 390 0.4487 MEDLKEKVNEGEPKEIKYRGVRRRPWGKFAAEIRDSARHGARVWLGTFNTAEEAARAYDRAAFEMRGTMAILNFPHEHLPCNVATFSNKSSSSKTELGKQVVVFEYLDDKLLEELLDCDDKTGNEHFDK 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03103 129 FunFam Ethylene-responsive transcription factor 2 17 76 - -
Spst1g03103 129 PANTHER DNA-BINDING DOMAIN 12 93 IPR044808 GO:0003700|GO:0009873
Spst1g03103 129 Gene3D AP2/ERF domain 16 76 IPR036955 GO:0003700|GO:0006355
Spst1g03103 129 SMART rav1_2 17 81 IPR001471 GO:0003700|GO:0006355
Spst1g03103 129 Pfam AP2 domain 17 67 IPR001471 GO:0003700|GO:0006355
Spst1g03103 129 PRINTS Ethylene responsive element binding protein signature 41 57 IPR001471 GO:0003700|GO:0006355
Spst1g03103 129 PRINTS Ethylene responsive element binding protein signature 18 29 IPR001471 GO:0003700|GO:0006355
Spst1g03103 129 ProSiteProfiles AP2/ERF domain profile. 17 75 IPR001471 GO:0003700|GO:0006355
Spst1g03103 129 SUPERFAMILY DNA-binding domain 17 77 IPR016177 GO:0003677
Spst1g03103 129 CDD AP2 17 76 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03103 Spst-Chr1 39651037 39651426 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g03103 14 121 AP2-EREBP Transcription Factor Family AT3G23230 54.098 1.19e-40 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Spst1g03103 AP2 1.5e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03103 - - gmx:100800069 198.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03103 1 39651037 39651426 Spst1g03103 1 39651037 39651426 ECH
Spst1g03103 1 39651037 39651426 Spst7g00449 7 3590376 3591224 PCT