Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03098 ATGGCAAAGGAGCAAATTCAGGTGCTAAATGCGCTTGATGTGGCAAAAACACAATGGTACCATTTCACTGCTATCATCATTGCCGGAATGGGCTTTTTCACCGATGCATATGATCTATTCTGCATATCCCTTGTTACAAAGCTGCTTGGCCGCATATACTACCATGTTGACGGTGCACCAAAGCCCGGTACATTGCCTCCGAATGTTTCAGCTGCTGTAAATGGTGTGGCTTTCTGTGGAACACTTTCAGGTCAGCTTTTCTTTGGCTGGCTTGGTGATAAGATGGGAAGGAAAAAAGTCTATGGCATGACTCTGATGTTGATGGTTATATGTTCCATCGGTTCCGGCCTTTCATTCGGACATAGTGCAAAATCTGTAATGGCAACTCTATGCTTCTTCCGGTTCTGGCTTGGCTTTGGTATTGGTGGAGACTATCCACTTTCTGCTACCATAATGTCTGAGTATTCTAACAAGAAGACTCGTGGTGCCTTCGTTGCTGCAGTGTTTGCCATGCAGGGTTTTGGCATTTTGGCAGGTGGTATATTTGCAATTATAATTTCAGCTGCATTCAAAAACAGGTTCGATGCACCACCATATGAGGTTGATCCGGTTGGCTCAACAGTTCCAGAAACAGACTACATTTGGAGGATAATTGTGATGGTGGGAGCACTACCAGCTGCATTGACTTACTACTGGCGAATGAAGATGCCGGAAACTGCCCGTTATACTGCTCTAGTAGCCAAGAACACGAAGCAGGCAGCAGCGGATATGTCTAAGGTTCTGCAGGTTGAGATTCAAGCTGAACCACAGAATGAGGTGCGGGCAAAGGCATATGGCTTGTTCTCAAGGGAGTTCCTCGTTCGCCATGGACTGCATCTGCTTGGTACATCAAGCACATGGTTCTTGCTTGATATTGCATTTTATAGTCAAAATCTTTTCCAGAAGGATATCTTCAGTGCAATTGGTTGGATACCTCCTGCCCAAACCATGAATGCTATTGACGAGGTTTACAGAATTGCAAGGGCTCAAACACTCATTGCTCTGTGCAGTACAGTTCCTGGCTACTGGTTCACAGTGGCTTTCATTGACAGGATAGGAAGATTTGCAATCCAATTGATGGGGTTCTTCTTTATGACTGTCTTCATGTTTGCTCTTGCTATTCCTTATGAGCACTGGACTCATAAGGATAACCGGATAGGATTTGTGGTGATGTATTCATTCACCTTCTTCTTTGCAAATTTTGGGCCTAATGCCACCACATTTGTGGTGCCAGCAGAGATTTTCCCTGCTAGATTCCGAAGTACTTGCCATGGAATTTCGTCAGCATCTGGGAAGCTTGGAGCTATAGTTGGTGCATTTGGGTTCTTGTACTTGGCACAAAACAAGGACAAGAGCAAAGCTGATGCAGGGTACCCTGCAGGTATTGGTGTAAAGAATGCACTTATCGTCTTAGGTGGAGTCAACATTTTGGGCTTCTTATTTACTTTCTTGGTTCCTGAGGCAAAGGGAAAATCGTTGGAGGAGATGTCAGGTGAGAATGATGAGGATGCTGGAACCGGGGAAGATTCAGAGCAATCACATTCTCACAACAATAACAACAGAACTGTTCCATATGTTTAG 1620 0.4469 MAKEQIQVLNALDVAKTQWYHFTAIIIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAPKPGTLPPNVSAAVNGVAFCGTLSGQLFFGWLGDKMGRKKVYGMTLMLMVICSIGSGLSFGHSAKSVMATLCFFRFWLGFGIGGDYPLSATIMSEYSNKKTRGAFVAAVFAMQGFGILAGGIFAIIISAAFKNRFDAPPYEVDPVGSTVPETDYIWRIIVMVGALPAALTYYWRMKMPETARYTALVAKNTKQAAADMSKVLQVEIQAEPQNEVRAKAYGLFSREFLVRHGLHLLGTSSTWFLLDIAFYSQNLFQKDIFSAIGWIPPAQTMNAIDEVYRIARAQTLIALCSTVPGYWFTVAFIDRIGRFAIQLMGFFFMTVFMFALAIPYEHWTHKDNRIGFVVMYSFTFFFANFGPNATTFVVPAEIFPARFRSTCHGISSASGKLGAIVGAFGFLYLAQNKDKSKADAGYPAGIGVKNALIVLGGVNILGFLFTFLVPEAKGKSLEEMSGENDEDAGTGEDSEQSHSHNNNNRTVPYV 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03098 539 FunFam Inorganic phosphate transporter 1-6 20 525 - -
Spst1g03098 539 NCBIfam phosphate:H+ symporter 11 512 IPR004738 GO:0005315|GO:0006817|GO:0016020
Spst1g03098 539 Gene3D MFS general substrate transporter like domains 20 527 IPR036259 -
Spst1g03098 539 Pfam Sugar (and other) transporter 26 510 IPR005828 GO:0016020|GO:0022857|GO:0055085
Spst1g03098 539 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 503 IPR020846 GO:0022857
Spst1g03098 539 MobiDBLite consensus disorder prediction 524 539 - -
Spst1g03098 539 SUPERFAMILY MFS general substrate transporter 12 510 IPR036259 -
Spst1g03098 539 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 20 501 - -
Spst1g03098 539 CDD MFS_PhT 25 502 - -
Spst1g03098 539 MobiDBLite consensus disorder prediction 507 539 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03098 Spst-Chr1 39514479 39516098 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g03098 1 516 Inorganic Solute Cotransporters AT3G54700 83.752 0.0 914
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03098 K08176 - gmx:100819445 1000.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03098 1 39514479 39516098 Spst1g03098 1 39514479 39516098 ECH
Spst1g03098 1 39514479 39516098 Spst7g00093 7 712641 714566 PCT
Spst7g00628 7 6211352 6212914 Spst1g03098 1 39514479 39516098 PCT