Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03065 ATGAAGACATCTTTTCAGCTCTCAATTTTCTCTCTGGTTTTGTCTTGTATACTTGGAGAGATTTCTGCACAGAAAGAAGCAGAGTCTCTTAGAACCTGGATGAACAGTTTGAACTCTCCCTTGCCACCTTCATGGAACAACAGCAACAATCCATGCAACTGGACTGGCATTACTTGCAACAATGCAGGAAGTGTTGTTGAGATAAAGCTCCCTAATTCAGGCCTAGATGGAACCCTGAACAGGTTTGACTTCTCAGCCCTTTCAAATCTCAGTAACTTCAATGTCAGTTTGAATAACTTTGTTGGAGAGATACCGGCTGGAATTGGAAATGCAACACAGCTGAAAGTACTTGATTTGAGTAGCAACAATTTCACCCTTTCAATCCCCCCAGAGATGGGAAACCTCCTACAACTTCAACTTCTTTCTCTCAATAATAATTCACTCCTAAATCAGATACCAGTTCAACTTAGCAATTTGCAGAATATATGGTTTCTTGATCTAGGGGCAAACTATTTGGAGGATCCTGACCCAATTCAGTTTAAGGGCATGGCATCAGAATTTGACAATTCTAGACATGACACAAAACCACTTAGAAGGGCTAATTCCAGAAGAAATTACGAACCTTTCAAACCTCAAACACCTAAGCTCGGACAAAACAAGCTTAATGGTACTATACCAAAGGAGATTGGTCTCTTGCCATACCTTGAGGTGCTTGAATTGAATCAAAATTCCTTCCAAGGGCCAATACCATCATCAATTGGAAATCTCCGTAACCTTCGGAGATTGGATGTTCACAACTCAGGAATAAATTCCAGCATTCCAGCTGAGATAGGCTTCTGCACCAACCTTACTTATCTTGATATGTCAGGAAATAGCCTTACAGGTTCCTTGCCACTTTCCCTGGCTTCATTAACCAGGGTAAGAGAGTTGGCAATCTCTTTTAACCATTTATCTGGAGAACTACATCCATCTCTTCTTTCCAGTTGGCCAGAACTCATTTCTTTGCAACTCCAATTGAATGACCTATCAGGAAGACTTCCACCTGAGATTGACTCACTTCACAACATCACCTTGCTCCTTTTTTCCAACCGGTTTTCTGGCCCGATACCTCCAGAAATAGGAAAGTTATCAAGCTTACAACATCTTGATCTGTCGTATAGTTCTTATAACGGTTCAATTCCACCAACCATTGGAAATTTACACAATCTTATCAAATTAAATCTGGCCTCAAACCAAATAAATGGAGCCCTTCCTCCTGAAATAGTTGATTTGGAAAGGTTACAGGTACTGGATTTGAGTCAAAACCAGCTTGCAGGACCTTTGCCTTCCTCCATAACCCGCTTGAAAAATATCAATCTACTTTATCTTCATTACAACAATTTCTCAGGAACTATTCCTGAAGATTTTGCACCTGCCTTTTTAAGCAATGTGAGTTTTGACAACAACAGCTTTTCTGGAAAGCTCCCATCCGGAATATGCAGAGGAGGGAATCTTATCTACTTGACAGCCAGTATGAATAATCTTACAGGTCCAATCCCAGAGAGTCTGAGAAACTGTTCTAGACTAATCAGGGTGATGCTTGGAAACAATCTTCTCAGTGGAGACATTACCAATGCATTTGGTATATACCCATATTTGAACTTCATTGATTTAGCACATAACCAAATCTATGGTTTGTTATCAAGTAACTGGGGAGAGTGCAAAACTCTCTCGAGTCTCAGCATAGCTGCCAATAAGCTACACGGAAATATTCCTCCAGAGCTTGGAAAATTGCCAAGTTTACAAAATCTTGACCTGTCTGAAAACAATCTCACAGGAAATATCCCAGTAGAGCTTTTTAGATCATCATCTAAACTACTCAAACTAAATTTGAGCAACAATTATCTCTCAGGTCAGATACCAAAAGGGATAGGAGAACTCTCACTGCTGCAGTTTCTGGACTTATCAGCCAACGATCTGAGTGGGCCAATTCCAAAAGAACTAGGAAACTGCCAGAAACTAATATTCTTGAAACTGAGCACGAATAACTTAGATGGACATATCCCATTTGATCTTGGGAATTTGCTCGAAAATTTGATATCACTGGAGGTTTTGAATCTTTCTCATAATCAGCTTTCTGGGACAATACCATCTGTTCTCAAAGGACTAATCAGCCTTCAGTTAATTGATATATCCCACAACAAACTTGAAGGTCCCCTCCCAGACCAAGAAGCTTTTCTTAATGCTACAGCAGAAGCACTGGCTGGCAATGCAGGTCTATGTACTGGTTCTGCTGGCAATGCAAATCTGAATCCGTGTGGTGGAGGGAAAACCAAAGCAAGTAAGAAACATAAGCTGGTAATTGCTGTAGTCATTCCAGTCGTTGCCTTAATCATTATTCTATTAATTCCCCTTGGAGTTTTCGTCTTCCGGCGTTATCATACAATTGATCAAGATGAAAAGTACAAGAGTTCAGATGGAAATAACTCATTCTTCATATGGAATTATAGGAATATGATAGAGTTCAAGGATATATGTGCTGCAACTGAGAATTTCAGTGATAAGTATTGCATTGGGGTAGGAGGACAGGGCAATGTCTACAAGGCAGTGCTTCCAACAGGTGAGACTTTTGCAGTGAAATGTCTACACCAGCATGAGGAAATGGACTTCTCTAGATACCAAATAAAGAATCTTACCTCTGAAATCCATGCAATAACTAACATTCGTCATCGAAATATTGTAAAAATGTGTGGCTTTAGTTACTTTTATGGCTCCATGTTTTTTATATACGAGTATGTAGAGAGAGACTCTTTGGCAAAGGTGTTGCAGAAGGAACAGGAGGCAAAGATCTTGACCTGGGACATTAGGCTAAACATGATAAAAGGGTTAGCAAATGCCCTATCATACCTGCACCATGACTGCGTACCCAGCATTATTCACCGAGACATTTCAGGAAACAATATTCTGTTGAACTCAGAATATGAGCCTAAGATCTCTGACTTTGGCACAGCAAGGTTGGTTAAAAATGGAGAATCAAATTGGACTGCACCGGCTGGTTCATATGGCTACATGGCACCAGAACTTGCATTTTCAATGAAGGTGACAGAAAAATGTGACGTTTACAGTTTTGGGATTGTTGCCCTAGAAATTCTGGCAGGGAAATACCCTGATGAGTTCCTTCTGAGTTTAGAATCTGGGGAATTTAATCAACAAAATTTAGATTTCCTAGACAAGAGGCCTCCTCCTCCTGAAGGTACTGATGCTCAAATGCTAATGTTGGTAGCAAGACTTATTCTAAAATGCATCGACAAAGATCCTTTGTGTCAACCCACCATGACGCATGTGTCCCAAGTGTTGCTCCCACTCTCTGTCCCTAGCTTTCAACATGTTCACACTTCACAATCTACTCCTTAA 3393 0.4038 MKTSFQLSIFSLVLSCILGEISAQKEAESLRTWMNSLNSPLPPSWNNSNNPCNWTGITCNNAGSVVEIKLPNSGLDGTLNRFDFSALSNLSNFNVSLNNFVGEIPAGIGNATQLKVLDLSSNNFTLSIPPEMGNLLQLQLLSLNNNSLLNQIPVQLSNLQNIWFLDLGANYLEDPDPIQFKGMASEFDNSRHDTKPLRRANSRRNYEPFKPQTPKLGQNKLNGTIPKEIGLLPYLEVLELNQNSFQGPIPSSIGNLRNLRRLDVHNSGINSSIPAEIGFCTNLTYLDMSGNSLTGSLPLSLASLTRVRELAISFNHLSGELHPSLLSSWPELISLQLQLNDLSGRLPPEIDSLHNITLLLFSNRFSGPIPPEIGKLSSLQHLDLSYSSYNGSIPPTIGNLHNLIKLNLASNQINGALPPEIVDLERLQVLDLSQNQLAGPLPSSITRLKNINLLYLHYNNFSGTIPEDFAPAFLSNVSFDNNSFSGKLPSGICRGGNLIYLTASMNNLTGPIPESLRNCSRLIRVMLGNNLLSGDITNAFGIYPYLNFIDLAHNQIYGLLSSNWGECKTLSSLSIAANKLHGNIPPELGKLPSLQNLDLSENNLTGNIPVELFRSSSKLLKLNLSNNYLSGQIPKGIGELSLLQFLDLSANDLSGPIPKELGNCQKLIFLKLSTNNLDGHIPFDLGNLLENLISLEVLNLSHNQLSGTIPSVLKGLISLQLIDISHNKLEGPLPDQEAFLNATAEALAGNAGLCTGSAGNANLNPCGGGKTKASKKHKLVIAVVIPVVALIIILLIPLGVFVFRRYHTIDQDEKYKSSDGNNSFFIWNYRNMIEFKDICAATENFSDKYCIGVGGQGNVYKAVLPTGETFAVKCLHQHEEMDFSRYQIKNLTSEIHAITNIRHRNIVKMCGFSYFYGSMFFIYEYVERDSLAKVLQKEQEAKILTWDIRLNMIKGLANALSYLHHDCVPSIIHRDISGNNILLNSEYEPKISDFGTARLVKNGESNWTAPAGSYGYMAPELAFSMKVTEKCDVYSFGIVALEILAGKYPDEFLLSLESGEFNQQNLDFLDKRPPPPEGTDAQMLMLVARLILKCIDKDPLCQPTMTHVSQVLLPLSVPSFQHVHTSQSTP 1130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03065 1130 SUPERFAMILY RNI-like 417 734 - -
Spst1g03065 1130 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 477 767 - -
Spst1g03065 1130 ProSiteProfiles Protein kinase domain profile. 845 1120 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g03065 1130 PRINTS Leucine-rich repeat signature 692 705 - -
Spst1g03065 1130 PRINTS Leucine-rich repeat signature 594 607 - -
Spst1g03065 1130 Gene3D Phosphorylase Kinase; domain 1 807 925 - -
Spst1g03065 1130 Pfam Protein kinase domain 848 1107 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g03065 1130 Pfam Leucine rich repeat 378 437 IPR001611 GO:0005515
Spst1g03065 1130 Pfam Leucine rich repeat 592 653 IPR001611 GO:0005515
Spst1g03065 1130 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
Spst1g03065 1130 ProSiteProfiles Leucine-rich repeat profile. 694 716 IPR001611 GO:0005515
Spst1g03065 1130 Gene3D Ribonuclease Inhibitor 22 200 IPR032675 -
Spst1g03065 1130 PANTHER LEUCINE RICH REPEAT KINASE 2 474 1116 - -
Spst1g03065 1130 SMART LRR_typ_2 591 615 IPR003591 -
Spst1g03065 1130 SMART LRR_typ_2 256 280 IPR003591 -
Spst1g03065 1130 SMART LRR_typ_2 400 423 IPR003591 -
Spst1g03065 1130 SMART LRR_typ_2 640 664 IPR003591 -
Spst1g03065 1130 SMART LRR_typ_2 716 741 IPR003591 -
Spst1g03065 1130 SMART LRR_typ_2 304 328 IPR003591 -
Spst1g03065 1130 SMART LRR_typ_2 135 159 IPR003591 -
Spst1g03065 1130 SMART LRR_typ_2 424 448 IPR003591 -
Spst1g03065 1130 SMART LRR_typ_2 692 715 IPR003591 -
Spst1g03065 1130 FunFam Nuclear pore complex protein NUP107 23 177 - -
Spst1g03065 1130 SUPERFAMILY RNI-like 222 466 - -
Spst1g03065 1130 Gene3D Ribonuclease Inhibitor 444 775 IPR032675 -
Spst1g03065 1130 FunFam Leucine-rich repeat receptor protein kinase MSP1 808 925 - -
Spst1g03065 1130 Gene3D Ribonuclease Inhibitor 325 443 IPR032675 -
Spst1g03065 1130 SUPERFAMILY L domain-like 37 185 - -
Spst1g03065 1130 Gene3D Transferase(Phosphotransferase) domain 1 926 1124 - -
Spst1g03065 1130 FunFam Os07g0541700 protein 926 1011 - -
Spst1g03065 1130 FunFam Leucine-rich repeat receptor-like protein kinase TDR 211 476 - -
Spst1g03065 1130 Pfam Leucine rich repeat N-terminal domain 24 60 IPR013210 -
Spst1g03065 1130 ProSitePatterns Tyrosine protein kinases specific active-site signature. 971 983 IPR008266 GO:0004672|GO:0006468
Spst1g03065 1130 Pfam Leucine Rich Repeat 694 716 IPR001611 GO:0005515
Spst1g03065 1130 Pfam Leucine Rich Repeat 282 304 IPR001611 GO:0005515
Spst1g03065 1130 SUPERFAMILY Protein kinase-like (PK-like) 821 1112 IPR011009 -
Spst1g03065 1130 Gene3D Ribonuclease Inhibitor 212 324 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03065 Spst-Chr1 39211400 39219736 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g03065 467 734 Receptor kinase-like Gene Family AT4G08850 38.007 2.83e-36 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Spst1g03065 Pkinase 5.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03065 - - ccaj:109803789 1613.59