Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Spst1g03048 | ATGAAGAAGATCAAGAACCAAATGAAAATCCAGATTTTCATCTTCTTTTGTTACATTGGGTGTTCATCCTATGGTTTTTCTGCTGCTGCAAATGATGAAGTATCGGCTTTGCTTTCCATAAAAGCAAGTCTCATCGATCCATTGAACACTCTTCAGGATTGGAAACTGCATGACAAAGTACTGGGAAAGGATGCAGCTCATTGTAGCTGGACAGGCATCAAATGCAACTCAGCTGGAGCTGTAGAGAAGCTTGATCTCTCCCACAAGAATCTCAGCGGTACAGTATCCAATGATATACAAGGACTTAAAAGTCTTACTTCTCTCAACTTGTGTTGCAATGCTTTTTCATCATCATTGCCAAAATCCTTAGCCAATCTCAGTGCACTTAACAACCTTGATGTAAGCCAAAATTTCTTCATTGGTGACTTTCCATTAGGCCTTGGAAGAGCATGGAAACTCGTGACATTAAATGCATCCAGCAATGAGTTCTCAGGTTCTCTTCCTGAAGACCTTGGAAATGCCTCTTCCTTAGAGATGCTTGATCTCAGAGGCAGCTTCTTTGTAGGATCAGTTCCAAAATCATTCAGTAACTTGCATAAGTTGAAGTTCCTTGGTCTATCAGGGAACAATCTGACTAGTAAAATTCCTGGAGAGCTGGGACAACTTTCGTCACTGGAGTATATGATCCTTGGATATAATGAATTTGAAGGTGGCATTCCAGAAGAGTTTGGCAACCTTACCAATCTTAAGTATCTTGATTTAGCAGTGGCCAATCTAGGTGGTGAGATTCCAGGTGGATTCGGAAAGCTCAAGTTGTTGAATACAGTTTTCTTATACAACAACAATTTTGAAGACAGAATTCCAGCATCAATTGGTAATATGACTTCTTTGCAGCTGCTGGATATTTCTGATAACATGTTGTCAGGAAAAATTCCAGCTGAAATAAGTCAGCTGAAGAATTTAAAACTTCTCAACGTGATGGGCAACCATCTGTCTGGTCCTGTGCCTTCTGGCTTTGGAGATTTGCCACAACTGGAGGTACTTGAGCTGTGGAACAATTCCTTGTCAGGGCCATTGCCTGGTAACCTTGGCAAGAATTCACAGTTGCAATGGTTGGATGTGTCATCCAATTCATTCTCTGGAGAGATTCCAGAAACCCTTTGCAGCCAGGGCAATCTCACCAAGCTTATACTATTCAACAATGCCTTCTCTGGTCCAATTCCATCAAGCCTATCAACTTGTTATTCACTTGTACGTGTTCGAATTCACAACAATTTTCTTTCTGGGACAGTTCCTGTAGGTCTTGGCAAGCTTGGGAAGCTTCAAAGGTTAGAATTGGCAAACAATAGTCTTTCTGGTGAAATTCCTGATGACATTGCTTCTTCCACATCCCTTTCCTTCATTGATCTCTCTACAAACAAACTCCGTTCTTCTCTTCCCTCCACTGTCCTTTCCATTCCAAACCTGCAAGCTTTCATGGTCTCCAACAACAACTTGGAAGGTGAAATCCCAGACCAATTCCAGGACTGTCCATCACTTGCAGTTCTTGATCTTTCATCAAATCATCTATCTGGAAGCATTCCAGAAAGCATTGCTTCTTGTCAGAAGTTGGTAAATTTGAACCTCCAAAACAACCAATTGACTGGTCAAATCCCAAATTCATTAGCTAAGATGCCTTCATTGGCCATGGTTGATCTTTCCAACAATTCTCTGACAGGCCAAATACCTGAAAGCTTTGGAATTTCTCCAGCTCTTGAAGCACTCAATGTCTCATACAATAAGTTAGAAGGCCCAGTCCCAGCAAATGGAATACTAAGAACAGTAAACCCAAATGATCTCGCGGGCAATGCTGGCCTATGTGGTGGTGTACTCCCTCCATGTGACCAAAACTCTGCCTACTTTTCAAGGCAAAGAAGCTTACGCACAAAGCATATGATTACGGCATGGATCACTGGAATATCATCAATCCTAGTTATTGGGATAGCGACTGTGGTAGCAAGATCTTTGTACATGAGATGGTACACTGACGGATTTTGCTTCCGAGAAAGATTTTATAAGGGTAGCAAAGGGTGGCCCTGGAGATTGATGGCATTTCAGAGGCTTGGTTTTACAAGTACTGACATTCTAGCTTGCATCAAGGAAACAAATTTGATTGGCATGGGAGCCACAGGGGTTGTTTATAAGGCTGAGGTACCGCAATCAAATACAGTTGTGGCAGTGAAAAAGTTGTGGAGAACAGGAACTGATATTGAAGTAGGAAGCAGTGGTGACCTTGTGGGGGAGGTGAATCTTTTAGGGAGATTAAGACATAGGAACATTGTTAGACTGTTAGGATTTCTTCATAATGACATTGATCTGATGATAGTTTATGAATTCATGCACAATGGCAACCTAGGAGAAGCCTTGCACGGTAGACAAGCAACAAGACTGCTTGTAGACTGGGTTTCGCGGTACAACATAGCTCTAGGAGTTGCACAAGGACTTGCTTATCTTCATCATGATTGTCATCCACCTGTTATCCATCGAGACATCAAGTCAAACAATATATTGCTTGATGCAAATCTTGAGGCAAGGATAGCAGATTTTGGTTTAGCCAAGATGATGATCCGGAAGAATGAAACAGTCTCCATGGTTGCTGGATCTTATGGCTACATTGCCCCTGAATATGGATATGCGTTAAAGGTAGATGAAAAGATTGATGTTTACAGTTATGGAGTAGTTTTGTTGGAGCTTCTCACAGGAAAGAGGCCTTTAGATACAGACTTTGGAGAGTCAATAGACATAGTAGAGTGGATTAGAATGAAGATTAGAGACAACAAATCTCTAGAAGAAGCATTAGACCCCAGTGTAGGAAATAGCAGGCATGTTGTAGAAGAGATGCTTTTAGTTCTAAGAATAGCAACTCTATGCACTGCCAAGCTCCCCAAGGACAGACCAACCATGAGGGACGTCATTATGATGCTTGGAGAGGCAAAGCCTCGGAGAAAGAGCAGTGGCAATGATGCAGCTAACAACAAAGAGTCACCAGTTTTTAGCACATCTCCAGTTAATGGCCTAATGTAG | 3063 | 0.4185 | MKKIKNQMKIQIFIFFCYIGCSSYGFSAAANDEVSALLSIKASLIDPLNTLQDWKLHDKVLGKDAAHCSWTGIKCNSAGAVEKLDLSHKNLSGTVSNDIQGLKSLTSLNLCCNAFSSSLPKSLANLSALNNLDVSQNFFIGDFPLGLGRAWKLVTLNASSNEFSGSLPEDLGNASSLEMLDLRGSFFVGSVPKSFSNLHKLKFLGLSGNNLTSKIPGELGQLSSLEYMILGYNEFEGGIPEEFGNLTNLKYLDLAVANLGGEIPGGFGKLKLLNTVFLYNNNFEDRIPASIGNMTSLQLLDISDNMLSGKIPAEISQLKNLKLLNVMGNHLSGPVPSGFGDLPQLEVLELWNNSLSGPLPGNLGKNSQLQWLDVSSNSFSGEIPETLCSQGNLTKLILFNNAFSGPIPSSLSTCYSLVRVRIHNNFLSGTVPVGLGKLGKLQRLELANNSLSGEIPDDIASSTSLSFIDLSTNKLRSSLPSTVLSIPNLQAFMVSNNNLEGEIPDQFQDCPSLAVLDLSSNHLSGSIPESIASCQKLVNLNLQNNQLTGQIPNSLAKMPSLAMVDLSNNSLTGQIPESFGISPALEALNVSYNKLEGPVPANGILRTVNPNDLAGNAGLCGGVLPPCDQNSAYFSRQRSLRTKHMITAWITGISSILVIGIATVVARSLYMRWYTDGFCFRERFYKGSKGWPWRLMAFQRLGFTSTDILACIKETNLIGMGATGVVYKAEVPQSNTVVAVKKLWRTGTDIEVGSSGDLVGEVNLLGRLRHRNIVRLLGFLHNDIDLMIVYEFMHNGNLGEALHGRQATRLLVDWVSRYNIALGVAQGLAYLHHDCHPPVIHRDIKSNNILLDANLEARIADFGLAKMMIRKNETVSMVAGSYGYIAPEYGYALKVDEKIDVYSYGVVLLELLTGKRPLDTDFGESIDIVEWIRMKIRDNKSLEEALDPSVGNSRHVVEEMLLVLRIATLCTAKLPKDRPTMRDVIMMLGEAKPRRKSSGNDAANNKESPVFSTSPVNGLM | 1020 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Spst1g03048 | 1020 | FunFam | MDIS1-interacting receptor like kinase 1 | 797 | 1007 | - | - | |
Spst1g03048 | 1020 | Gene3D | Ribonuclease Inhibitor | 283 | 386 | IPR032675 | - | |
Spst1g03048 | 1020 | FunFam | Leucine-rich repeat receptor-like protein kinase PXL1 | 30 | 185 | - | - | |
Spst1g03048 | 1020 | Gene3D | Ribonuclease Inhibitor | 387 | 628 | IPR032675 | - | |
Spst1g03048 | 1020 | SUPERFAMILY | L domain-like | 67 | 375 | - | - | |
Spst1g03048 | 1020 | FunFam | Leucine-rich repeat receptor-like protein kinase PXL1 | 186 | 286 | - | - | |
Spst1g03048 | 1020 | Pfam | Leucine rich repeat N-terminal domain | 30 | 76 | IPR013210 | - | |
Spst1g03048 | 1020 | FunFam | Leucine-rich repeat receptor-like protein kinase PXL1 | 370 | 631 | - | - | |
Spst1g03048 | 1020 | MobiDBLite | consensus disorder prediction | 990 | 1020 | - | - | |
Spst1g03048 | 1020 | ProSitePatterns | Protein kinases ATP-binding region signature. | 718 | 742 | IPR017441 | GO:0005524 | |
Spst1g03048 | 1020 | MobiDBLite | consensus disorder prediction | 1002 | 1020 | - | - | |
Spst1g03048 | 1020 | SUPERFAMILY | Protein kinase-like (PK-like) | 708 | 988 | IPR011009 | - | |
Spst1g03048 | 1020 | Gene3D | Ribonuclease Inhibitor | 29 | 183 | IPR032675 | - | |
Spst1g03048 | 1020 | Gene3D | Ribonuclease Inhibitor | 184 | 282 | IPR032675 | - | |
Spst1g03048 | 1020 | SMART | serkin_6 | 712 | 988 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Spst1g03048 | 1020 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 839 | 851 | IPR008271 | GO:0004672|GO:0006468 | |
Spst1g03048 | 1020 | SUPERFAMILY | RNI-like | 287 | 597 | - | - | |
Spst1g03048 | 1020 | SMART | LRR_typ_2 | 102 | 125 | IPR003591 | - | |
Spst1g03048 | 1020 | SMART | LRR_typ_2 | 294 | 318 | IPR003591 | - | |
Spst1g03048 | 1020 | SMART | LRR_typ_2 | 198 | 222 | IPR003591 | - | |
Spst1g03048 | 1020 | SMART | LRR_typ_2 | 342 | 366 | IPR003591 | - | |
Spst1g03048 | 1020 | SMART | LRR_typ_2 | 438 | 462 | IPR003591 | - | |
Spst1g03048 | 1020 | SMART | LRR_typ_2 | 510 | 534 | IPR003591 | - | |
Spst1g03048 | 1020 | SMART | LRR_typ_2 | 558 | 582 | IPR003591 | - | |
Spst1g03048 | 1020 | SMART | LRR_typ_2 | 486 | 509 | IPR003591 | - | |
Spst1g03048 | 1020 | PANTHER | LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED | 242 | 989 | - | - | |
Spst1g03048 | 1020 | Gene3D | Phosphorylase Kinase; domain 1 | 712 | 796 | - | - | |
Spst1g03048 | 1020 | ProSiteProfiles | Protein kinase domain profile. | 712 | 1011 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Spst1g03048 | 1020 | Gene3D | Transferase(Phosphotransferase) domain 1 | 797 | 1013 | - | - | |
Spst1g03048 | 1020 | Pfam | Leucine rich repeat | 487 | 547 | IPR001611 | GO:0005515 | |
Spst1g03048 | 1020 | Pfam | Leucine rich repeat | 176 | 234 | IPR001611 | GO:0005515 | |
Spst1g03048 | 1020 | Pfam | Leucine rich repeat | 273 | 331 | IPR001611 | GO:0005515 | |
Spst1g03048 | 1020 | Pfam | Protein kinase domain | 714 | 984 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Spst1g03048 | 1020 | FunFam | Leucine-rich repeat receptor protein kinase EMS1 | 287 | 369 | - | - | |
Spst1g03048 | 1020 | FunFam | MDIS1-interacting receptor like kinase 1 | 712 | 796 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Spst1g03048 | Spst-Chr1 | 39096857 | 39100125 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Spst1g03048 | 11 | 1020 | Receptor kinase-like Gene Family | AT1G08590 | 58.892 | 0.0 | 1163 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Spst1g03048 | Pkinase | 2e-46 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Spst1g03048 | - | - | gmx:100811284 | 1814.66 |