Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03023 ATGGAACTCAGAACAGAAGTTGAAAACGAAAACAGAAGGAAAGAAAGAAAGAAAGACAAGTTAACGCAGCACGTGGCTCTTTTGCCCCGGGTCGGGGGTATCTCTTATCCGCAAGTGAGGGAGAGCCCCACCACGAAGCTATGTTCCCCTATGGCGCGTTTTCAGGAGATGATGGGATTGGCGTTTGAGAAGCTAACGAAACGGCTGGGGCAGTGTCGTTTCGTCAATAAGCCTTTTGTCTTAAGCACGCGAAAGAGAGGGAGTATCTTCCACCGCGTTTCATGGATCCGGAAACCGGTCCTCCTGCATTGCCTTCTCTCTCTTAGGGTTTCACGTTTCACGCTTTTCGAGCTATGCGTTCTCTCCCTCCTGCCTCGGCCCGCTGCCGTCTCCGCCATGACCGCTGCCGCCGGACGCTCTGCCGGAATCTCGCAGTCTGCAGCTCGCTCTTTCAGCCTTCTCTCTCCTGATGATGCTCTACGCCTCTGTCGCCTGCGGCCAGAGAGAATGCCGGTGTCGGTCATCTTCCTTTTTGCTCTTCTCAACTTGTTTTTCTCTTCCCAAGTGAAGTCATTTTCTTTGAGTGTGCCATTTGCTTCATCAGAACGCTCTAAAATGTGGTTTGCTAGACCTTCTTCTGGACCATCTTCTGCACCTATTCCATCTCCAACTCATCAAGGTCCTCATGTGACTCCAAGAAGACATCATTATCATCACCGCCGTCATCATAGCACAAGACCTTATGTAGTGGCTCCACCCCCTTCAGAAGACCAAGCTTGTGACCAAATCTGTACTGAACCGCTTACATCAACTCCATTTGGTTCACCTTGCGGTTGTGTATTTCCCATGAAAGTACGACTTACACTGGATGTAGCACCTTATGCTGTTTTTCCAGTAATGACTGAGTTAGAGAATGAAATTGCGTTAGGCACGTATTTAGAGCAGAGTCAGGTGAAGATAATGGGTGCCACTGCTGACAGTCAAAATCAGGGAAGAACTGTTGTTGATATTAACTTGGTTCCACTGGGAGAAAAATTTGACAATACAACTGCAGCTTTGACATATGAGAGGTTTTGGCACAAGAAGGTTCCTCTAAATAGGAGCCTTTTTGGTGACTATTCTGTTGTGAACATTACTTATCCAGGAATGCCATCATCGCCTCCATATGGATCTTTAGTTGGGAGTGGTCCCAGTCAAAGTGTCGATGGCATTCTTCCTGTCAGTGCCAACTTTGTGAGCAAGAACCAGAAAATGAATCTCAGGACCATTATCATCATTGCTTTATCTTCCTTTGTACTCTTGCTGGTTTTGGTGGGAGCATTTTCAATTACTTTGAAATGGAGGAAGACTAGGGGACCATCAAGTGCTGTTGGCCCTGCTGCATTCACATCATCTCTGAACAAGAGATCAGGCTTGGGGTCTATGTTGTCAAGCAGTATTACAAGCTCAACATCAGTGTCACTTATGTCCACAATGGCTACTTCCATTCTCTCTGTTAAAACTTTTTCACTTTCTGAGCTTGAGAAAGCAACAGATAAGTTTAGTTCAAAGAGAGTACTGGGTGAAGGAGGATTTGGACGTGTTTATAGTGGGACATTGGAAGATGGGGCAGAAGTTGCAGTTAAGCTGCTAACAAGAGATAATCAGAATGGAGACCGTGAATTTATTGCAGAGGTTGAGATGCTAAGCCGTTTGCATCACCGTAATCTAGTCAAACTGATTGGTATATGCATTGAGGGGCGTAGGCGTTGCTTGGTGTATGAGCTTGTTCGCAATGGAAGTGTTGAGTCCCATCTGCATGGTGATGACAAAATAAAGGGGATGCTAGATTGGGAAGCAAGGATGAAAATTGCCCTAGGAGCTGCAAGAGGATTGGCTTATCTTCATGAGGATTCCAATCCCCGTGTAATTCATCGAGACTTCAAAGCTAGCAACGTGCTACTAGAAGATGACTTTACTCCCAAAGTTTCTGATTTTGGATTGGCAAGAGAAGCAACTGAAGGAAGTAATCATATTTCAACACGGGTGATGGGAACTTTTGGGTATGTTGCCCCAGAATATGCAATGACCGGGCATTTGCTCGTCAAAAGTGATGTTTATAGTTATGGTGTTGTGTTGCTTGAACTTCTCACAGGCAGAAAGCCAGTGGATATGTCTCAACCTCAGGGACAGGAGAATCTTGTAACTTGGGCACGGCCAATGTTGACTAGTAGAGAAGGTCTAGAACAGCTGGTGGATCCATCTTTGGCTGGCAGTTACAACTTTGATGACATGGCAAAGGTTGCTGCAATCGCTTCAATGTGTGTTCACGCGGAGGTTACACAGAGACCTTTTATGGGTGAAGTTGTGCAGGCTCTTAAGTTAATATACAATGACACAGATGAAACTTGTGGGGATTGTTGTAGTCAGAAGAATTCCTCTGCTCAGGAGTCTGATTTTAGAGGTGACCTTGCCCCTTCTGATAGCAGTTGGTGGAATGCGGGAGGGTTAACCCCTCGATTAACTTATGGGCAAGCATCTTCCTTTATCACTATGGAATACAGTTCTGGTCCACTTGAAGAAATGGAGAACAGACCGTTTTCTACATCAAGTTTGATTGGAGATGAAATATCATTGCCGATTAGGCATGGGAATAGATCAGGCCCCTTAAGAACAGTCCGAAGCAAGCTGTCCTTGCATAGATTTACAGGAAGTCGGAGTGAGCATGGAGGACCTTCTTCCAAGCGTAATTGGAATGATGGTTACTGGGTTTAA 2754 0.4564 MELRTEVENENRRKERKKDKLTQHVALLPRVGGISYPQVRESPTTKLCSPMARFQEMMGLAFEKLTKRLGQCRFVNKPFVLSTRKRGSIFHRVSWIRKPVLLHCLLSLRVSRFTLFELCVLSLLPRPAAVSAMTAAAGRSAGISQSAARSFSLLSPDDALRLCRLRPERMPVSVIFLFALLNLFFSSQVKSFSLSVPFASSERSKMWFARPSSGPSSAPIPSPTHQGPHVTPRRHHYHHRRHHSTRPYVVAPPPSEDQACDQICTEPLTSTPFGSPCGCVFPMKVRLTLDVAPYAVFPVMTELENEIALGTYLEQSQVKIMGATADSQNQGRTVVDINLVPLGEKFDNTTAALTYERFWHKKVPLNRSLFGDYSVVNITYPGMPSSPPYGSLVGSGPSQSVDGILPVSANFVSKNQKMNLRTIIIIALSSFVLLLVLVGAFSITLKWRKTRGPSSAVGPAAFTSSLNKRSGLGSMLSSSITSSTSVSLMSTMATSILSVKTFSLSELEKATDKFSSKRVLGEGGFGRVYSGTLEDGAEVAVKLLTRDNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRRRCLVYELVRNGSVESHLHGDDKIKGMLDWEARMKIALGAARGLAYLHEDSNPRVIHRDFKASNVLLEDDFTPKVSDFGLAREATEGSNHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPQGQENLVTWARPMLTSREGLEQLVDPSLAGSYNFDDMAKVAAIASMCVHAEVTQRPFMGEVVQALKLIYNDTDETCGDCCSQKNSSAQESDFRGDLAPSDSSWWNAGGLTPRLTYGQASSFITMEYSSGPLEEMENRPFSTSSLIGDEISLPIRHGNRSGPLRTVRSKLSLHRFTGSRSEHGGPSSKRNWNDGYWV 917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03023 917 CDD STKc_IRAK 520 789 - -
Spst1g03023 917 ProSiteProfiles Protein kinase domain profile. 514 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst1g03023 917 Gene3D Phosphorylase Kinase; domain 1 485 589 - -
Spst1g03023 917 Gene3D Transferase(Phosphotransferase) domain 1 590 811 - -
Spst1g03023 917 PANTHER OS01G0750732 PROTEIN 252 809 - -
Spst1g03023 917 SUPERFAMILY Protein kinase-like (PK-like) 492 789 IPR011009 -
Spst1g03023 917 FunFam receptor-like serine/threonine-protein kinase ALE2 487 589 - -
Spst1g03023 917 MobiDBLite consensus disorder prediction 229 246 - -
Spst1g03023 917 ProSitePatterns Serine/Threonine protein kinases active-site signature. 636 648 IPR008271 GO:0004672|GO:0006468
Spst1g03023 917 FunFam Receptor-like serine/threonine-protein kinase ALE2 590 808 - -
Spst1g03023 917 MobiDBLite consensus disorder prediction 212 253 - -
Spst1g03023 917 ProSitePatterns Protein kinases ATP-binding region signature. 520 542 IPR017441 GO:0005524
Spst1g03023 917 Pfam Protein tyrosine and serine/threonine kinase 516 786 IPR001245 GO:0004672|GO:0006468
Spst1g03023 917 MobiDBLite consensus disorder prediction 895 917 - -
Spst1g03023 917 Coils Coil 4 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03023 Spst-Chr1 38869453 38879004 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g03023 263 906 Receptor kinase-like Gene Family AT5G56890 54.600 0.0 644
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Spst1g03023 PK_Tyr_Ser-Thr 5.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03023 - - gmx:100792309 1390.94