Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03016 ATGCCACACTCGCCGGCCGCCGCTTCCCAGGTCTATTTGCTTTTCTCGCCGTTTTTCTATTTTCCCGACCGAGATTCCGCTTTCATCATTTCTCTCTTTTTCGCTGTGGGATTCGGGAAGCGGAACGATTTCCTCTTTCGCGTTTTCGGGAGCAATTACTCTGTTGAAATGAATGGGGCGCAGAACAGGAGGGTTCACAATGTTGAGAAACCTTTCCCAGGTTGCCTGGGAAGAATGGTGAATCTCTTTGATTTGACGGGGGGTGTGAATGGAAACAAGCTACTCACGGACAGGCCTCACCGCGATGCATCATCACTTTCAAGAAGTCAATCAGATGTTGCTAGGATCACAAGTCCTACTTTGGGTGATCATATAGAGGATAAGCTGATTGTTTCTGACTCAATGAGAGCTTTGTCAAATAAGAAAATAAATGGAACACCCATCAAGATGCTCATAGACCAAGAAATGTCCAAAGAAATTGTTTCAAAGCACAACCCACCACCAAACGTAGTTGCAAAATTGATGGGGCTTGAAGCCCTCCCGCGGGGTGATCCTAATTTATCTGTGGAGAGAAGCCATAGAGGAGATTATTCTTCTCAACATATGTGTGATCATTCAGGGACACCATTCAAACGCTGGCAGATGGATGATAGATTTATGGACAAGGAAATGCTGCATGAAGTTCATCCAAACACAGAACAGATTGCTTACAAGGATATTTATGAAATATGGCTGCAATCACAAAGAGCAGGCACTGTAAGAGACAAGACACCGGAGAGAGAAAAGTGGTCTGAAGATGTTAATGGGAAGAAAATGGCTCTCATTCGTCAGAAATTTATGGAAGCCAAACGTCTGTCTACTGATGAGAGACTACGCCAGTCCAAGGAGTTTGACGATGCCTTGGAAGTTTTAAGTTCAAATAATGATCTGTTAATCAGGTTATTGGATTCTCAAAATCTTTATGAACTTCAGTCTACTCCAGTAGCAGAGACAAAGCGTATTACTGTTCTTAAACCTTCGAAGATGGTTGATAACGAAAAATCCATTGGAAAGGGGAAGAAAAATGACAAGCAGATCAGGAAACCAGCAAATGTTGGTGCTGCATGGGAGAGATACAGCCCTGGATACACTCCTCCTAGTCAGAAAGTGGATGAGTTTCCAGTTCAACCTACACGTATAGTGGTATTGAAGCCTAGCCCTGGGAAGACTCATGAGATTAAGGCTGTGGTTTCTCCCACAATGTTGTCACCTCGAAATTTGCCTAGTGGAAATTTTTACCAGGAACCTGAAGATGATGATGTACTTGAATCGAGAAAAGTGGATAGTGAAATTACACAGCAAATGCATGAAAATGTGAGGAGTCATCAAAGAGATGAAACATTCTATTCTTCAGTATTTTCCAATGGCTATACTGGTGATGAGAGTTCGTTCAACAAATCAGATCATGAGTGTAATGCAGGGAATTTTAGTGATTTGGAAGTTATGTCACCATCCCCAAGACATTCTTGGGATTACATCAATCGCTGTGGCAGTCCCTTTTCGTCATCATCCTTCAGCCGGGCATCCTGTTCTCCTGAGTCGTCAGTATGCAGAGAGGCCAAAAAGCGCCTTTCTGAAAGATGGGCCATGATGGCATCAAATAAAGGTCCTCAAGAACAAAGGCATGTGCGCAGAAGCTCAACCTTAGGTGAGATGCTTGCTCTTTCGGATGTAAAGAAATCTGAAATATCTGAGCTTGAAGGTATTCCTAAAGAACAGGAACCAAATGAATCTGTTTCTTGTAGTCAAAATTTTAGTGCGGAAACATGTGTGGACGGTTCTCCCAGAAACCTTTCTAGGTCAAAATCTGTTCCGACAACTTCTACTGTCTTTGATAATGGGCTCAATGTTGAAGTTTGTGATAATGATGCTGGCAAAGCACATGTGTCTGGGGAGCTGACAAAGTCAAAGAGTATGAAATCATCATTTAAAGGGAAAGTTACCAGTTTCTTCTTCTCAAGGAACAAGAAACCAACCAGGGAAAAATCTTGTCTATCGCAATCTAAAAATGAATCTCAATCTACTCTCACTGGAGCATCAGATTCTCCAGTAAATACATCTGGAGTCCTCAGGGATGATGTGTCTCAAAGCTTCAACAGTGGCTCCATTGGAGAGTGTTCTCTTCCAGCTCCATATGAATCATCAGGCAAAATTTTATCAGATTCTGTCTCTATTGGACAAGGCACAATACCCGAGGAGTCAGGATTGACACTGTCAAAACCCACGGTGCCTGGGATTTCAAGTGAAAACCAGGGTCAGCCCAGTCCAATATCAGTTTTAGAGCCTCCATTTGAAGATGATAATGCTGCTAACGAGTCCTTGGGCTGTGGGAAGGGTGGTGCTCACCTTGGATCACGTGGGTCTTTGAAGTCTAATTTAATTGACAAATCACCACCTATTGAATCAATAGCTCGGACCCTCTCGTGGGACGATTCTTGTGCAGAGGTAGCAAGTCCATACCCATTAAAACCCTCCTTGGGTTCCTTAGACACCAAGGTAGAGGATCAAGACTGGCTTATCTTTGTCGAGAAACTACTATCAGCTGCTGGAATTGATGATCAAGTGCTGTCGGACTCGTTTTACTCAAGATGGCATTCCCTCGAAAGCCCATTGGATCCATCATTGAGGGACAGTTATGCCAATCTGAATGACAAGGAGCCTCAGCAACTCCATGAGGCCAAGCGAAGGCAGAGGAGATCTAATCAGAAGCTTGTATTCGATTGTGTTAACTTTTCACTGATAGATATTACTGGTTATGGATCAGAGAATTACTTGACGGGTAGGTTGTGTAGTGGGAGCCACAGCAAGTTCCAAGTCCCAGAGGATGCACCTCCCCCATTGGTAGACCTCGTTATGGCACGGATGAAGGAGTTAATATCTGGTGCTATGAGGTCTGTTTGGGTGGATTGTGGGGACAGTAACAGCCTGGTGGTAGAGAGTGTTGTCAGAAAAGAGGTTGTGGGGAAAGGGTGGGTTGAGCTTATGCCATTGGAGATGGATATTTTGGTGAAGGAAGTAGAGGGGAAGTTGCTAGAAGAACTTGTGGAGGATGCTGTGGTTGATTTGACAGGCAGGGCCTGA 3120 0.4391 MPHSPAAASQVYLLFSPFFYFPDRDSAFIISLFFAVGFGKRNDFLFRVFGSNYSVEMNGAQNRRVHNVEKPFPGCLGRMVNLFDLTGGVNGNKLLTDRPHRDASSLSRSQSDVARITSPTLGDHIEDKLIVSDSMRALSNKKINGTPIKMLIDQEMSKEIVSKHNPPPNVVAKLMGLEALPRGDPNLSVERSHRGDYSSQHMCDHSGTPFKRWQMDDRFMDKEMLHEVHPNTEQIAYKDIYEIWLQSQRAGTVRDKTPEREKWSEDVNGKKMALIRQKFMEAKRLSTDERLRQSKEFDDALEVLSSNNDLLIRLLDSQNLYELQSTPVAETKRITVLKPSKMVDNEKSIGKGKKNDKQIRKPANVGAAWERYSPGYTPPSQKVDEFPVQPTRIVVLKPSPGKTHEIKAVVSPTMLSPRNLPSGNFYQEPEDDDVLESRKVDSEITQQMHENVRSHQRDETFYSSVFSNGYTGDESSFNKSDHECNAGNFSDLEVMSPSPRHSWDYINRCGSPFSSSSFSRASCSPESSVCREAKKRLSERWAMMASNKGPQEQRHVRRSSTLGEMLALSDVKKSEISELEGIPKEQEPNESVSCSQNFSAETCVDGSPRNLSRSKSVPTTSTVFDNGLNVEVCDNDAGKAHVSGELTKSKSMKSSFKGKVTSFFFSRNKKPTREKSCLSQSKNESQSTLTGASDSPVNTSGVLRDDVSQSFNSGSIGECSLPAPYESSGKILSDSVSIGQGTIPEESGLTLSKPTVPGISSENQGQPSPISVLEPPFEDDNAANESLGCGKGGAHLGSRGSLKSNLIDKSPPIESIARTLSWDDSCAEVASPYPLKPSLGSLDTKVEDQDWLIFVEKLLSAAGIDDQVLSDSFYSRWHSLESPLDPSLRDSYANLNDKEPQQLHEAKRRQRRSNQKLVFDCVNFSLIDITGYGSENYLTGRLCSGSHSKFQVPEDAPPPLVDLVMARMKELISGAMRSVWVDCGDSNSLVVESVVRKEVVGKGWVELMPLEMDILVKEVEGKLLEELVEDAVVDLTGRA 1039
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03016 1039 MobiDBLite consensus disorder prediction 743 768 - -
Spst1g03016 1039 MobiDBLite consensus disorder prediction 678 706 - -
Spst1g03016 1039 Pfam Domain of unknown function (DUF4378) 853 1030 IPR025486 -
Spst1g03016 1039 Pfam Protein of unknown function (DUF3741) 276 319 IPR022212 -
Spst1g03016 1039 PANTHER M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED 57 1038 - -
Spst1g03016 1039 MobiDBLite consensus disorder prediction 94 113 - -
Spst1g03016 1039 MobiDBLite consensus disorder prediction 674 706 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03016 Spst-Chr1 38785830 38790938 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g03016 57 1036 TRM (TON1 Recruiting Motif) Superfamily AT4G28760 44.566 0.0 664
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03016 - - gmx:100816611 1700.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03016 1 38785830 38790938 Spst1g03016 1 38785830 38790938 ECH
Spst1g03016 1 38785830 38790938 Spst7g00707 7 6969555 6973151 PCT