Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03006 ATGGCAGGAAAAGGAGAGGGTCCTGCTATCGGAATCGATCTCGGGACCACATACTCTTGTGTCGGCGTCTGGCAACATGACCGCGTTGAAATCATTGCCAACGACCAAGGCAACAGAACGACGCCGTCTTACGTCGGATTCACTGACACCGAGCGTCTCATTGGTGACGCCGCCAAGAACCAAGTCGCCATGAATCCCATCAACACTGTTTTCGATGCCAAGAGGTTGATTGGTCGTAGATTTAGTGATGCCCCAGTTCAGAGTGATATCAAATTGTGGCCTTTTAAGGTCATTGCTGGTCCTGCTGATAAGCCAACTATTGTAGTTAACTACAAGGGTGAGGAGAAACAATTTGCTGCTGAAGAAATTTCTTCTATGGTGCTCATGAAGATGCGTGAGATTGCTGAGGCTTACTTAGGGTATACAGTAAAGAATGCTGTTGTTACTGTCCCTGCATACTTCAATGATTCTCAGCGTCAAGCAACTAAGGACGCTGGTGTTATTGCTGGTCTTAATGTCATGCGTATTATCAATGAGCCTACTGCAGCTGCCATTGCATATGGTCTTGACAAGAAGGCATCAAGTGTAGGCGAGAAGAATGTCTTGATCTTTGATCTAGGCGGTGGGACCTTCGATGTTTCTTTACTTACGATTGAGGAGGGTATTTTTGAGGTGAAAGCCACAGCTGGTGACACCCATCTTGGAGGAGAGGATTTTGATAACAGGATGGTGAACCACTTTGTGCAAGAGTTTAAGAGAAAGAACAAGAAAGACATAAGTGGAAACCCCCGAGCACTTAGAAGGTTGAGGACCGCATGTGAGAGGGCAAAGAGAACCTTATCATCTACTGCTCAGACTACCATTGAAATTGATTCGCTGTACGAAGGAATCGATTTCTACTCCACCATTACCCGTGCCAGATTTGAGGAGCTCAATATGGATCTCTTTAGAAAATGTATGGAACCTGTGGAGAAATGTCTAAGAGATGCTAAGATGGACAAAAGAAGTGTTGATGACGTTGTACTTGTTGGTGGTTCTACCAGAATTCCCAAGGTTCAGCAACTACTCCAGGACTTCTTTAATGGAAAGGAGCTGTGCAAGAGCATTAACCCTGATGAGGCTGTTGCTTATGGTGCGGCTGTTCAGGCTGCAATCTTAAGTGGTGAGGGCAATGAGAAGGTTCAGGATCTTCTCCTCCTTGATGTCACTCCTCTATCACTTGGATTGGAGACTGCTGGTGGTGTGATGACTGTTCTGATTCCTAGGAACACTACAATTCCAACAAAGAAGGAACAGGTTTTCTCAACATATTCTGATAACCAGCCAGGTGTGTTGATCCAGGTCTTTGAGGGTGAGAGAGCAAGGACCAGAGATAACAATTTGTTGGGCAAATTTGAACTTTCTGGCATTCCTCCTGCTCCCAGGGGTGTTCCTCAGATTACAGTCTGCTTTGACATTGATGCCAATGGTATCTTGAATGTCTCTGCTGAAGATAAAACCACTGGACAGAAAAATAAGATCACCATCACCAATGACAAGGGTAGATTATCAAAAGAAGATATTGAGAAGATGGTTCAAGAGGCTGAGAAGTACAAATCTGAGGACGAAGAGCATAAAAAGAAGGTTGAGGCCAAGAATGCCTTGGAAAACTATGCATACAATATGAGGAACACTGTGAAGGATGACAAGATTGGGGGCAAGCTGGATCCTGCCGACAAGAAGAAGATTGAGGATGCAATTGAGCAATCAATTCAATGGCTAGACAGCAACCAGCTTGCAGAGGCAGACGAGTTTGAAGACAAAATGAAGGAATTGGAAAGCATCTGCAATCCTATCATTGCTAAAATGTACCAGGGTGGTGCTGGTCCAGACATGGGTGGTGTTGGTGCTGGTGCTAGTGCTGCAGAAGATGATTATACTCCTTCTGGTGGAAGTGGCGCAGGTCCCAAGATTGAGGAAGTGGACTAA 1968 0.4517 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDAPVQSDIKLWPFKVIAGPADKPTIVVNYKGEEKQFAAEEISSMVLMKMREIAEAYLGYTVKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKASSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKRSVDDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVFEGERARTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEDIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTVKDDKIGGKLDPADKKKIEDAIEQSIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQGGAGPDMGGVGAGASAAEDDYTPSGGSGAGPKIEEVD 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03006 655 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Spst1g03006 655 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 392 549 IPR029047 -
Spst1g03006 655 CDD HSPA1-2_6-8-like_NBD 9 387 - -
Spst1g03006 655 Gene3D - 71 126 - -
Spst1g03006 655 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 543 624 IPR029048 -
Spst1g03006 655 FunFam Heat shock 70 kDa 235 318 - -
Spst1g03006 655 Gene3D - 10 384 - -
Spst1g03006 655 ProSitePatterns Heat shock hsp70 proteins family signature 3. 340 354 IPR018181 -
Spst1g03006 655 Gene3D - 546 619 IPR029048 -
Spst1g03006 655 SUPERFAMILY Actin-like ATPase domain 8 191 IPR043129 -
Spst1g03006 655 ProSitePatterns Heat shock hsp70 proteins family signature 2. 203 216 IPR018181 -
Spst1g03006 655 Gene3D - 192 366 - -
Spst1g03006 655 FunFam Heat shock 70 kDa protein 71 126 - -
Spst1g03006 655 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 391 545 IPR029047 -
Spst1g03006 655 Pfam Hsp70 protein 9 618 IPR013126 GO:0005524|GO:0140662
Spst1g03006 655 Coils Coil 521 541 - -
Spst1g03006 655 PANTHER HEAT SHOCK PROTEIN 70KDA 9 583 IPR013126 GO:0005524|GO:0140662
Spst1g03006 655 FunFam Heat shock cognate 70 kDa protein 2 319 366 - -
Spst1g03006 655 SUPERFAMILY Actin-like ATPase domain 198 388 IPR043129 -
Spst1g03006 655 PRINTS 70kDa heat shock protein signature 36 48 - -
Spst1g03006 655 PRINTS 70kDa heat shock protein signature 337 353 - -
Spst1g03006 655 PRINTS 70kDa heat shock protein signature 396 415 - -
Spst1g03006 655 PRINTS 70kDa heat shock protein signature 146 166 - -
Spst1g03006 655 PRINTS 70kDa heat shock protein signature 58 66 - -
Spst1g03006 655 PRINTS 70kDa heat shock protein signature 209 219 - -
Spst1g03006 655 PRINTS 70kDa heat shock protein signature 369 389 - -
Spst1g03006 655 PRINTS 70kDa heat shock protein signature 8 21 - -
Spst1g03006 655 PRINTS 70kDa heat shock protein signature 477 493 - -
Spst1g03006 655 MobiDBLite consensus disorder prediction 620 655 - -
Spst1g03006 655 FunFam Heat shock 70 kDa protein 197 260 - -
Spst1g03006 655 Gene3D Actin; Chain A, domain 4 235 318 - -
Spst1g03006 655 FunFam Heat shock 70 kDa 391 545 - -
Spst1g03006 655 FunFam Heat shock 70 kDa protein 539 655 - -
Spst1g03006 655 FunFam Heat shock protein 70 10 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03006 Spst-Chr1 38657067 38659586 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g03006 1 655 Calmodulin-binding Proteins AT3G12580 90.992 0.0 1215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03006 K03283 - gmx:100777767 1234.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03006 1 38657067 38659586 Spst7g00723 7 7226362 7228911 ECH
Spst1g03006 1 38657067 38659586 Spst1g03006 1 38657067 38659586 ECH
Spst7g00723 7 7226362 7228911 Spst1g03006 1 38657067 38659586 ECH
Spst1g01620 1 20050053 20052731 Spst1g03006 1 38657067 38659586 ECH
Spst1g03006 1 38657067 38659586 Spst1g01620 1 20050053 20052731 ECH
Spst1g03006 1 38657067 38659586 Spst7g00723 7 7226362 7228911 PCT