Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03001 ATGCCGTTTAACATAACATCGATCAAGACATCCTCTAATGGAGTGTGGCAAGGTGATAATCCTTTAGACTATGCCTTCCCACTCCTCATAGTTCAAATCACCTTGGTCCTCATAGTCACTCGCACCCTCGCTTTACTTCTCAAACCTCTCCGACAGCCAAAAGTTATTGCCGAGATTGTGGGTGGAGTTCTATTGGGCCCATCGGTACTGGGAAGAAACAAAAGTTATTTGCATCGTATATTCCCTTCATGGAGCACGCCGACACTGGAATCTGTAGCAAGCATAGGTCTGCTTTTTTTCCTATTCCTCGTAGGTTTGGAGCTCGATCTCCATTCCATTCGCCGGAGCGGCCGAAGAGCCTTCATCATCGCCGCCGTGGGGATCTCTGTTCCTTTCGTCAGCGGCATCGGAGTCGCCGTCGTCCTCCGCAAAACCGTGGACGGCGCCGATAACTCCGGCTTCGCGCAGTTCCTCGTCTTCATGGGTGTGGCGCTTTCCATCACCGCATTCCCGGTGCTGGCGCGCATCCTGGCGGAGCTGAAGCTCCTCACCACGAGCGTGGGGGAAACCGCGATGGCCGCAGCGGCGTTCAACGACGTGGCCGCGTGGATTCTACTGGCGCTGGCAGTGGCCCTGGCCGGGGACGGCAACGGGTCCCACAAGAGTCCTCTGGTGTCGTTGTGGGTTCTCCTCTCGGGGCTGGCGTTCGTGGTTTTCATGATGGTGGTTGTGCGACGGGCGATGCAGGTGGTCGCGAAGAGGGGCGAAAACGACGCCGTTGGGGAGGTTTACGTTTGTTTGACGCTGGCGGGGGTGTTGGTGTCGGGGTTCATGACGGACCTGATCGGGATTCACTCGATATTCGGGGCGTTCGTGTTCGGGTTAACTCTTCCGAAAGAGGGAAACTTTGCGAAGAAGCTAACAGAGAGGATCGAGGATTTTGTTTTGGGTTTGTTGCTCCCACTCTACTTTGCCTCTAGTGGGTTGAAAACCGACGTAACTAGCATACGTGGCGCTTCCGCGTGGGGGCTGCTGGTTCTGGTCATAACCACCGCTTGTGCTGGGAAAATTCTTGGCACCTTCGTGGTCGCCATGTTCTGCATGATTCCCGCTAGGGAATCGCTCACGCTTGGCGTCCTCATGAACACTAAAGGCCTCGTTGAACTCATCGTACTCAACATTGGAAAGGAGAAAAAGGTTTTGAATGATGAAATGTTTGCAATTTTAGTACTTATGGCTCTATTCACTACCTTCATCACAACACCAATAGTGATGGCCATCTACAAACCAGCTCGAGTGAAGTCAACGAAAACCCGGCGGAAGTTAGGTGACATTTCCGTGGGTTCTAGGGATGACACGGTTGACAAGTTCAGAGTCTTGGCCTGTCTCCATGGTCCAGCCAATATCCCTTCAATCATAAATTTGATTGAATCAACTCGAAGCACAAAGAACTCATTAATAAAGTTGTTCATGATGCATCTTGTTGAGCTCACAGAGCGCTCATCCTCTATCATCATGGTTCATCGTGCTCGTAGGAATGGTTTCCCTTTCTTCAACCGCTCCCATCGTGACGAGTGCCATGACAGACTTGCAGGAGCTTTTCAAGCCTACAGTCAGCTAGGCCAAGTCAATGTTCGATCCACAACCACGGTGTCTTCTCTCTCCACCATGCATGAGGACATCTGCCACGTTGCAAAGGAGAAAATGGTGACCATGATTATTTTGCCCTTTCACAAACAGTGGAGGACAGAAGTGAACGAGAATAACGAGAGATATCAGGTGTTGGAAAATGCAAGCCACGAGTGGAGAGTGGTGAACCAAAAGGTACTTAACAATGCACCTTGCTCGGTGGTCGTGCTTGTGGATCGTGGATATGGTAATTTGCCTCAAACTTCAAGCTCAAGTTCCATTGTGTCCCAACGAGTGTGCATCATCTTCTTCGGTGGCCCGGATGATCGTGAGGCTCTAGAGTTGGGGAAGAAGATGCTTGAACACCCAACAGTTAAAGTAAGTATTGTAAGGTTTATTGAAAAGAATGGGTTGGACAAGAATAACGTTGTGTTAAGCTTCTCACCTCACAAAAACAATCACGATAGTTACAGCTTCTCCACTGCTAAAATGAACCCCCAGAGAGAAAAGGAGTTGGATGAGATGTCAATCAAAGAGTTTCAAAGCAAGTTGAATGACATGGTCGAATACATTGAGAAGTTTTGCGAAAACATTGTGGAAGACGTATTAGTAATAGGAAAAAGTGGGGATTATGATCTCATAATTGTTGGAAAGGGTCGATTCCCATCAAATATGGTGGCTGGATTGGCAGAAAGGAAACCAGAGCATGCTGAGTTAGGTCCTATTGGAGATGTTTTAACTTCATCAGAACACCAAGTGTTCTCATCAATATTGGTTATTCAACAACATGACGTGACATTGGTAGATGATGCTCCTGTATGCATGGTGCATGATGAGAATGACATGGTCAACACAAGTGCTTCTTCATCTCGTGTAGGAGGAATTTCAATAGGCAGTGACAATGCAGTGTAA 2541 0.488 MPFNITSIKTSSNGVWQGDNPLDYAFPLLIVQITLVLIVTRTLALLLKPLRQPKVIAEIVGGVLLGPSVLGRNKSYLHRIFPSWSTPTLESVASIGLLFFLFLVGLELDLHSIRRSGRRAFIIAAVGISVPFVSGIGVAVVLRKTVDGADNSGFAQFLVFMGVALSITAFPVLARILAELKLLTTSVGETAMAAAAFNDVAAWILLALAVALAGDGNGSHKSPLVSLWVLLSGLAFVVFMMVVVRRAMQVVAKRGENDAVGEVYVCLTLAGVLVSGFMTDLIGIHSIFGAFVFGLTLPKEGNFAKKLTERIEDFVLGLLLPLYFASSGLKTDVTSIRGASAWGLLVLVITTACAGKILGTFVVAMFCMIPARESLTLGVLMNTKGLVELIVLNIGKEKKVLNDEMFAILVLMALFTTFITTPIVMAIYKPARVKSTKTRRKLGDISVGSRDDTVDKFRVLACLHGPANIPSIINLIESTRSTKNSLIKLFMMHLVELTERSSSIIMVHRARRNGFPFFNRSHRDECHDRLAGAFQAYSQLGQVNVRSTTTVSSLSTMHEDICHVAKEKMVTMIILPFHKQWRTEVNENNERYQVLENASHEWRVVNQKVLNNAPCSVVVLVDRGYGNLPQTSSSSSIVSQRVCIIFFGGPDDREALELGKKMLEHPTVKVSIVRFIEKNGLDKNNVVLSFSPHKNNHDSYSFSTAKMNPQREKELDEMSIKEFQSKLNDMVEYIEKFCENIVEDVLVIGKSGDYDLIIVGKGRFPSNMVAGLAERKPEHAELGPIGDVLTSSEHQVFSSILVIQQHDVTLVDDAPVCMVHDENDMVNTSASSSRVGGISIGSDNAV 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03001 846 FunFam Cation/H(+) antiporter 15 28 434 - -
Spst1g03001 846 Coils Coil 578 598 - -
Spst1g03001 846 Gene3D - 28 437 IPR038770 -
Spst1g03001 846 PANTHER CATION/H + ANTIPORTER 8 807 - -
Spst1g03001 846 Pfam Sodium/hydrogen exchanger family 36 423 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03001 Spst-Chr1 38594418 38599471 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g03001 75 825 Antiporter Super Family AT3G53720 65.098 0.0 902
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03001 K26731 - gmx:100798644 1214.13