Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g03000 ATGATCAGAACGACGTCGTCGGAGGGAGCGTGGCAGGGCGATAATCCTCTCAACCACGCTCTCCCTCTGTTGATCATTCAAACCATTCTCGTACTTTTTCTTAGTCGCACCCTCGCCTTTCTACTCAAACCCCTTCGCCAACCCAAAGTCGTAGCCGAAATCATTGGTGGAATTTTGTTGGGACCTTCTGCTTTTGGACGCAACAAAACATTCATGAACACAGTGTTCCCATCGTGGAGCACTGCGATGCTGGAATCTGTGGCGAGTCTTGGCCTCATATTTTACCTTTTTCTAGTGGGTTTGGAGCTTGACCTTGCCACGATTAGCCGGAGCGGGAAGCGAGCCTTCAACATCGCGGTGGCCGGAATAACGCTGCCGTTCATCTTTGCCGCGGGAGTGACGTTCCTTCTGCAAAGAGCCGTTGGGTCTGAGAACCAGAACTTTGGGTACCTTCAGCACTTGGTTTTCTTAGGTGTTGCTCTGTCCATCACAGCTTTCCCTGTGCTCGCGCGCATTTTAGCTGAGCTCAAGCTCTTGACCACGAGTCTCGGAGAGACTGCCATGGCCGCGGCGGCGTTCAATGACATGGCGGCGTGGGTTTTATTGGCCTTGGCGGTGGCTTTGGCTGGCCAGGGACACAAAGGGAGCTTGCTCACATCATTATGGAAGTTTTGGTTCTGTCTGGTTTTAGGAGTGGCGTTTGTGGCGTTGATGATGATCCTCGTTCGACCCCTGATGAACAGAATTGCGAATAAGTGTTGTCACGAACATGACGTGTTATCCGAAACGCACGTATATTTAACCCTTGCAGGAGTAATGTTTGCAGGGTTCATGACAGACATAATAGGTATACATTCAATTTTTGGAGGCTTTATTTTTGGACTAACCATACCCAAGGAAAGTGAATTTGCAAGCAGATTAACCAGAAGAATAGAGGACTTCGTCTCCACGTTGCTGCTTCCCTTGTACTTCGCTTCAAGTGGTTTGAAAACTGATGTGAGTAAGCTCCACCGTATGATGGATTGGGGACTTCTTTTGTTCGTCACGTGCACGGCTTGTGCTGGGAAGATTCTGGGGACTTTTGCGGTGGCAGTGATGTGCATGGTGCCTCTCAGGGAATCGTTGACTCTTGGAGTTTTGATGAACACCAAAGGGTTGGTGGAGCTAATAGTTCTCAATATTGGGAGAGAGAAAAAGCAGGTTCTAAACGACGAGATGTTTACCATCCTTGTGCTCATGGCTCTCTTCACCACCTTCATTACAACTCCAATTGTCTTGGCCATATATAAACCCTCTCCTATTAACTCCATTCCGCAAAACCTGTCCCGGCTCACAGAATCCAAGCTTCGTATTCTTGCTTGCATCATGGAACTTACAACATAA 1383 0.4852 MIRTTSSEGAWQGDNPLNHALPLLIIQTILVLFLSRTLAFLLKPLRQPKVVAEIIGGILLGPSAFGRNKTFMNTVFPSWSTAMLESVASLGLIFYLFLVGLELDLATISRSGKRAFNIAVAGITLPFIFAAGVTFLLQRAVGSENQNFGYLQHLVFLGVALSITAFPVLARILAELKLLTTSLGETAMAAAAFNDMAAWVLLALAVALAGQGHKGSLLTSLWKFWFCLVLGVAFVALMMILVRPLMNRIANKCCHEHDVLSETHVYLTLAGVMFAGFMTDIIGIHSIFGGFIFGLTIPKESEFASRLTRRIEDFVSTLLLPLYFASSGLKTDVSKLHRMMDWGLLLFVTCTACAGKILGTFAVAVMCMVPLRESLTLGVLMNTKGLVELIVLNIGREKKQVLNDEMFTILVLMALFTTFITTPIVLAIYKPSPINSIPQNLSRLTESKLRILACIMELTT 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g03000 460 FunFam Cation/H(+) antiporter 15 23 434 - -
Spst1g03000 460 PANTHER CATION/H + ANTIPORTER 6 457 - -
Spst1g03000 460 Pfam Sodium/hydrogen exchanger family 29 425 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Spst1g03000 460 Gene3D - 23 432 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g03000 Spst-Chr1 38553454 38560987 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g03000 6 431 Antiporter Super Family AT4G23700 57.512 1.51e-153 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g03000 K26731 - gmx:100799165 682.945