Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02990 ATGGCTGGTTCTAAACAAAAACTGTTTAATAGACTGAAGCCATTCATAGGTGTAGTGTTCTTACAGTTTGGATATGCTGGTATGGATGTTCTATCCAAAGCTGCACTGAACCAGGGAATGAGTAACTATGTATTTGTCGTGTACCGTCATGTTTTTGCTCTTGTTGTCACGCTCCCTTTTGCAGTGTTCTTGGAGAAGAAAGTGAGGCCGAAGATGACATTTTCAATCTTCATGAAGATAGTGATTCTCAGCTTGCTAGAGCCAGTTATTGACCAAAATTTATATTTTTTGGGAATGAAGTACACCACAGCAACCTTTGCCGTTTCCATGTACAATGTCCTCCCTGCCATTACCTTTCTCATGGCTTGGATTCTCAGGCTTGAGAAGGTAAAATTAAAAAGTGTACGCAGTCAAGCAAAGGTGGTGGGAACTTTAGCTACTGTTGCAGGTGCCATGATCATGACACTAATAAAGGGCCCAATACTTGATCTTTTTGGAACACACGGAAGCAATACACACAACCTGGAAAATGGTGGGATAAATATTCAACATGCAATTAAGGGATCGGTGATGATCACAATTGGCTGCTTTAGTTGCGCTTGTTTCATGATTCTCCAAGCTATTACCATTGAAGCGTACCCTGCTGAGCTCTCTCTTACAGCATGGATATGCCTATTGGGTTCGGTTGAAGGTGGCATAGTGGCACTGGTTATGGAAAGGAATAATTTTTCAGCCTGGTCTCTGAAATGGGATACAAAATTGCTAGCTGCTGTCTACAGTGGCATAGTGTGCTCAGGAATGGCTTATTACATCCAAGGAGCGGTGATGAAAGATAGAGGCCCTGTCTTTGTAACAACTTTTAACCCTCTTGGCATGGTCATTGTAGCTATCATGGGTTCCTTCTTTCTGGCAGAACAAATGTACCTCGGAAGGGCAATTGGAGCTGTTGTAATTATTTTAGGGCTGTATCTTGTGGTGTGGGGTAAAAGCAACGAGTACGAGTCATCAAGCACTATTACTGAAGATCATATATTACCAGCCAAGCAAACAATAGAAAAAAGCAGCGAAAAAGACAGAGAGGAACATTCTAATTTTGAAGTCATCACTCTCAGTAAGTTAGGCGCAGCAAGCATAGCACAAGATGAACAAGTATGA 1155 0.4182 MAGSKQKLFNRLKPFIGVVFLQFGYAGMDVLSKAALNQGMSNYVFVVYRHVFALVVTLPFAVFLEKKVRPKMTFSIFMKIVILSLLEPVIDQNLYFLGMKYTTATFAVSMYNVLPAITFLMAWILRLEKVKLKSVRSQAKVVGTLATVAGAMIMTLIKGPILDLFGTHGSNTHNLENGGINIQHAIKGSVMITIGCFSCACFMILQAITIEAYPAELSLTAWICLLGSVEGGIVALVMERNNFSAWSLKWDTKLLAAVYSGIVCSGMAYYIQGAVMKDRGPVFVTTFNPLGMVIVAIMGSFFLAEQMYLGRAIGAVVIILGLYLVVWGKSNEYESSSTITEDHILPAKQTIEKSSEKDREEHSNFEVITLSKLGAASIAQDEQV 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02990 384 Pfam EamA-like transporter family 19 154 IPR000620 GO:0016020
Spst1g02990 384 Pfam EamA-like transporter family 187 326 IPR000620 GO:0016020
Spst1g02990 384 PANTHER WAT1-RELATED PROTEIN 13 336 IPR030184 GO:0016020|GO:0022857
Spst1g02990 384 SUPERFAMILY Multidrug resistance efflux transporter EmrE 248 330 - -
Spst1g02990 384 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02990 Spst-Chr1 38452218 38454606 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02990 5 374 Nodulin-like Gene Family AT2G37460 64.420 1.55e-172 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02990 - - gmx:100777050 672.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02990 1 38452218 38454606 Spst1g02990 1 38452218 38454606 ECH
Spst1g02990 1 38452218 38454606 Spst7g00739 7 7617135 7620465 PCT