Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst1g02980 ATGAAGAAGTTATTAGCTGAAGAATTGTCCCGAGAAATTGAACCCAAAAGAAGAGCTCCCGGTGTCATAGGCAGATTAATGGGTCTTGATGGAATTCCGTTGCAATTGCCTGCTAATAAGCATCATAAGCATGTGTCAGAACATAACATAGAAGGAACAACCCCGGCGGTGAAAACTCGAACCAGTGGTAAATTATATGGTAGTCGAACATCTAGGAGAAGTTCAAAGTATAAACAAGATTTTAAGGATGTGTTTGAGGTCTCAGAGATCTCAAACATAAAGAGCTGTAGGTATGCATCGCAGGGGTCTGTAAAGTTGAAGATCACTGATGATGAAACGTCATTTGTTGAACAGAAATTCATGGATTCCAAACTCCGTGCAACGTATCAAGATTTACAGTCTTCCCAGGATTCCCATGATACACTGGAGATTCTAGACTATAACAATGATCTTTTGCAAAAATACTTTAAGCGGCCAGATTCTCTGTTTAAAAGGCATCTAGTTGATCAGCAAGGTTCCCCTTCCCAATCACATTTTGGTCACATTGAAGGTACCAAATCATCAGATATAGAGAACTATCAACATGGTGATGTAAGCCAGAAGCCGGATAACGAGATCAAGGGGTTAAATTACAGTAGATCTCATCAGAAGCATCATGATGGTCATTTAGTCAGAAGACAGGCCATTCATAGTTCACCAAAATCATCAAAGCCTCATTTTAAGGGAAGAAATGAGCCTGATGCAGTCCCAACAAGGATTGTTATCCTGAAACCTAATCTTGGAAAAATGCAGAAAGCTAGCAAAATTGGTTCTTCACATACTTGTATGTTTGAGTATGGAAAGTGTGCTGAATTTTCAGATAGCAGATTTAGGGACAATGATAATGCCTGGCATTCAAGGAAGAATTCCTTGGAATCTAGAGAAATTGCAAAGGACATCACAAGCCAAATGAAAAGTAGTTTGAGTAATGGCTCTATGTTATTTTCATCTTCTAGATTTAGAGGAAATACTTGGGACGATAGCTCGTGTAGTTTTTCTGGGAATGAATCTCTTGAGGAATCAGAAGTGACACCTGCAACTTTGGGAAAGTCAGTTGAAATAAGTAATACTATCAGCCCATCATCCTGTTTTAGTGAATCATTTGTGAGTAAAGAGGCAAAGAAGAGATTATCAGAGAGGTGGAAAATGTCACTCAAGTCTCAGCAGGGCCGTTCTGTCTCCAGGAGTGGCACTCTGGCTGAAATGCTCGCTTTCCCTGACAAGGAAAGGAAAACAACTAATTTTGACAGCATCCCTAGGGGGGAAGGTTTACGTGATAAACTTTCTAGCAATGGTAAACCTGCTGGGTGGGTTGAACCATTGGGTATTAGCAGTAGGGATGGATGGAAGGATGGATGTATTGGAAGTTTACCAAGGTCTAAGTCTCTTCCTGCTTCGTATACTACTGCCTTTGGTAGTCCTAGAACAGTTCTGCGCCATGAAGCTCTTCATGATGATCGATTTATGATGCCAAATGTAGCCTGTACACCAGGAAGGAAGAATGTAGTGAAATGTCTTGATCAGAGACAGTGTATGAATACTAGGAACTCAAAATCTGATCATAATAAGTCTTGGTGTTCTCATCCATCAAACATAGAAGGCAATGAGTCTTCCCCAGACTTAAATACAATTCAAAATAAACTGAAGATTAATCTTGCTGAGGATTTGCCGAAGCAAGAAGTGTTGGCCTCTGAATCATTATCTGATATCCTCAGAGAAACTATTGCAGTTACTGAAGCTGTGGACGTGGAAGATGAAAATGCAATTGGTTCATCTGAATCTTATATTAAGGAGTCATCAGTTGGGTCTTCAAGTAAAAATTCTGTCCCCTTGCAACCACCTGTATCTGGACTCGAATCTTCATGCTGTAAAGACGCGGATCAACCCAGTCCAGTCTCAGTGCTAGAACCTTCGTTTACTGATGATCTGCCATCTTGTTGTGAGTGTTTTGAAAGTCTCAGTGTTGACATACAAGGGCTTCGAATGCAACTTCAGTTGCTGAAGCTAGAATCTGAAGAATTTGTGGAAGGACCCGTGCTAATTCAAAGTGATGAAGATGGTGGCGAAACATATTCAGGAATTTCTGAAGACAATGGATTACGTAAGACAGGAGAAAGCTGGGAGTCTTCCTACATGATTGATGTCTTGTCCGAATCTCGTATTAATAGAGCTCAGCCTGATGCATTTTTGGAAGCTTGGCATTCTCCTGAATGCCCTGTTAGTCTTTCAGTGTTTGATGAACTTGAAAAGAGGTACTCTGATTGGAGTACTTGTCCAAGGTCCGAAAGGAGATTGCTTTTTGACCGTATAAATTGTGGAATTATCAATATATACGAGCAATTCATCAGTGCACAGTCATGGGTAATCCCTTCGAGAGTCACAAATCCTTGTTCTAATTCTAAATTGATTAAAAATGGACTCCAAAATTGTCTATACAGGATGCTGTGGAGCCAGGGAAAAGTAAAGGATACGGCACTGGGGAAGCTGTTGGTTAGCGAATTGCAGTGGTTGAACTTAAGAGATGACATTGATGAAATAGGTAGGGAAGTTGAGAGCTTGTTACTAGATGATCTAGTGGCAGAGATAGCAGTTGCAGAGGCATTCTGCACCTGA 2652 0.4065 MKKLLAEELSREIEPKRRAPGVIGRLMGLDGIPLQLPANKHHKHVSEHNIEGTTPAVKTRTSGKLYGSRTSRRSSKYKQDFKDVFEVSEISNIKSCRYASQGSVKLKITDDETSFVEQKFMDSKLRATYQDLQSSQDSHDTLEILDYNNDLLQKYFKRPDSLFKRHLVDQQGSPSQSHFGHIEGTKSSDIENYQHGDVSQKPDNEIKGLNYSRSHQKHHDGHLVRRQAIHSSPKSSKPHFKGRNEPDAVPTRIVILKPNLGKMQKASKIGSSHTCMFEYGKCAEFSDSRFRDNDNAWHSRKNSLESREIAKDITSQMKSSLSNGSMLFSSSRFRGNTWDDSSCSFSGNESLEESEVTPATLGKSVEISNTISPSSCFSESFVSKEAKKRLSERWKMSLKSQQGRSVSRSGTLAEMLAFPDKERKTTNFDSIPRGEGLRDKLSSNGKPAGWVEPLGISSRDGWKDGCIGSLPRSKSLPASYTTAFGSPRTVLRHEALHDDRFMMPNVACTPGRKNVVKCLDQRQCMNTRNSKSDHNKSWCSHPSNIEGNESSPDLNTIQNKLKINLAEDLPKQEVLASESLSDILRETIAVTEAVDVEDENAIGSSESYIKESSVGSSSKNSVPLQPPVSGLESSCCKDADQPSPVSVLEPSFTDDLPSCCECFESLSVDIQGLRMQLQLLKLESEEFVEGPVLIQSDEDGGETYSGISEDNGLRKTGESWESSYMIDVLSESRINRAQPDAFLEAWHSPECPVSLSVFDELEKRYSDWSTCPRSERRLLFDRINCGIINIYEQFISAQSWVIPSRVTNPCSNSKLIKNGLQNCLYRMLWSQGKVKDTALGKLLVSELQWLNLRDDIDEIGREVESLLLDDLVAEIAVAEAFCT 883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst1g02980 883 MobiDBLite consensus disorder prediction 425 440 - -
Spst1g02980 883 PANTHER AFADIN 1 876 - -
Spst1g02980 883 MobiDBLite consensus disorder prediction 425 444 - -
Spst1g02980 883 Pfam Domain of unknown function (DUF4378) 722 874 IPR025486 -
Spst1g02980 883 Pfam Protein of unknown function (DUF3741) 117 161 IPR022212 -
Spst1g02980 883 MobiDBLite consensus disorder prediction 527 552 - -
Spst1g02980 883 Pfam DUF761-associated sequence motif 14 33 IPR032795 -
Spst1g02980 883 MobiDBLite consensus disorder prediction 188 249 - -
Spst1g02980 883 MobiDBLite consensus disorder prediction 188 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst1g02980 Spst-Chr1 38333592 38338082 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst1g02980 1 881 TRM (TON1 Recruiting Motif) Superfamily AT3G53540 34.022 3.83e-120 386
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst1g02980 - - pvu:PHAVU_001G171300g 1398.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02980 1 38333592 38338082 Spst7g00747 7 7719629 7725064 PCT